Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 U6.73-201ENST00000619194 103 ntBASIC2.24□□□□□ -2.05
TNFSF4P23510 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TNFSF4P23510 SNORA27.1-201ENST00000362604 124 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 Y_RNA.143-201ENST00000363520 106 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 Y_RNA.446-201ENST00000384178 104 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 SNORA8-201ENST00000384574 139 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 RNA5SP323-201ENST00000391094 133 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 MRPS10P1-201ENST00000448483 130 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFSF4P23510 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.23□□□□□ -2.05
TNFSF4P23510 RNU6-397P-201ENST00000516226 104 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 RNU1-142P-201ENST00000516682 145 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 SNORA40.15-201ENST00000516884 107 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 RNU6-897P-201ENST00000517135 105 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 MIR4438-201ENST00000585271 93 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.23□□□□□ -2.05
TNFSF4P23510 SDR42E1P4-201ENST00000620894 481 ntBASIC2.23□□□□□ -2.05
TNFSF4P23510 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
TNFSF4P23510 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TNFSF4P23510 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
TNFSF4P23510 AC062016.1-201ENST00000355719 319 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 SNORD115-30-201ENST00000364117 82 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 Y_RNA.361-201ENST00000365515 120 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 RNU6-937P-201ENST00000384325 106 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 RNU6-1160P-201ENST00000384546 104 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 RNU11-5P-201ENST00000391216 129 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 RNU2-52P-201ENST00000410680 190 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 AL121890.1-201ENST00000435457 205 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFSF4P23510 RNA5SP282-201ENST00000516355 108 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 RNU7-110P-201ENST00000516891 62 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 RNU6-1137P-201ENST00000517073 99 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 AC027419.1-201ENST00000522976 328 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 AC131281.1-201ENST00000522984 164 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFSF4P23510 MIR5092-201ENST00000583139 88 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.22□□□□□ -2.05
TNFSF4P23510 AL033523.1-201ENST00000605153 153 ntBASIC2.22□□□□□ -2.05
TNFSF4P23510 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TNFSF4P23510 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
TNFSF4P23510 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF4P23510 Y_RNA.111-201ENST00000363248 100 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 RNU6-407P-201ENST00000365280 104 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 RNU6-21P-201ENST00000384710 107 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 RNA5SP467-201ENST00000391274 118 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 AC244636.1-201ENST00000421152 228 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFSF4P23510 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFSF4P23510 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 RNA5SP20-201ENST00000515976 84 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 AC084364.2-201ENST00000546924 395 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 AL773524.1-201ENST00000614065 229 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 MIR376A1-201ENST00000616574 68 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TNFSF4P23510 AC010615.1-201ENST00000594254 1764 ntBASIC2.21□□□□□ -2.06
TNFSF4P23510 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TNFSF4P23510 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TNFSF4P23510 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.2□□□□□ -2.06
TNFSF4P23510 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 Y_RNA.331-201ENST00000365267 102 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 MIR606-201ENST00000384851 96 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 MIR520A-201ENST00000384862 85 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 AL031003.1-201ENST00000404229 172 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 U3.40-201ENST00000408706 208 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 RNA5SP100-201ENST00000410903 110 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 RNA5SP59-201ENST00000410922 110 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 RNU6-1199P-201ENST00000411249 104 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
TNFSF4P23510 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.2□□□□□ -2.06
TNFSF4P23510 RPL23AP6-201ENST00000446637 472 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.2□□□□□ -2.06
TNFSF4P23510 RPL23AP7-203ENST00000449021 469 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFSF4P23510 AC097462.1-201ENST00000514125 324 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 RNU6-1143P-201ENST00000516125 104 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 RNU7-99P-201ENST00000516271 62 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 AC023157.2-201ENST00000540596 141 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.2□□□□□ -2.06
TNFSF4P23510 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.2□□□□□ -2.06
TNFSF4P23510 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.2□□□□□ -2.06
TNFSF4P23510 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
TNFSF4P23510 AL136360.1-201ENST00000503377 1900 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
TNFSF4P23510 RNU6-112P-201ENST00000363599 104 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 Y_RNA.153-201ENST00000363615 91 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 RNU6-324P-201ENST00000363957 106 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 Y_RNA.210-201ENST00000364161 110 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 Y_RNA.510-201ENST00000384511 114 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 RNU2-20P-201ENST00000410425 191 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 RNU6-1186P-201ENST00000410429 97 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms