Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 Y_RNA.483-201ENST00000384380 101 ntBASIC2.35□□□□□ -2.03
MMP8P22894 RNU6-505P-201ENST00000384427 107 ntBASIC2.35□□□□□ -2.03
MMP8P22894 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
MMP8P22894 RNU6-21P-201ENST00000384710 107 ntBASIC2.35□□□□□ -2.03
MMP8P22894 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
MMP8P22894 MIR1302-6-201ENST00000408466 90 ntBASIC2.35□□□□□ -2.03
MMP8P22894 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.35□□□□□ -2.03
MMP8P22894 AC114982.1-201ENST00000469402 321 ntBASIC2.35□□□□□ -2.03
MMP8P22894 HMGB3P17-201ENST00000504195 649 ntBASIC2.35□□□□□ -2.03
MMP8P22894 RNU6-155P-201ENST00000516347 100 ntBASIC2.35□□□□□ -2.03
MMP8P22894 RNU6-948P-201ENST00000516374 107 ntBASIC2.35□□□□□ -2.03
MMP8P22894 AL161670.1-201ENST00000554348 137 ntBASIC2.35□□□□□ -2.03
MMP8P22894 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.35□□□□□ -2.03
MMP8P22894 MIR3149-201ENST00000584629 83 ntBASIC2.35□□□□□ -2.03
MMP8P22894 AC006001.4-201ENST00000622243 395 ntBASIC2.35□□□□□ -2.03
MMP8P22894 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.35□□□□□ -2.03
MMP8P22894 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MMP8P22894 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MMP8P22894 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MMP8P22894 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MMP8P22894 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
MMP8P22894 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.34□□□□□ -2.03
MMP8P22894 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
MMP8P22894 MTND5P6-201ENST00000422338 1798 ntBASIC2.34□□□□□ -2.03
MMP8P22894 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
MMP8P22894 Y_RNA.16-201ENST00000362421 102 ntBASIC2.34□□□□□ -2.03
MMP8P22894 RNU6-472P-201ENST00000384299 107 ntBASIC2.34□□□□□ -2.03
MMP8P22894 Y_RNA.541-201ENST00000384640 113 ntBASIC2.34□□□□□ -2.03
MMP8P22894 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
MMP8P22894 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
MMP8P22894 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MMP8P22894 RNU6-1199P-201ENST00000411249 104 ntBASIC2.34□□□□□ -2.03
MMP8P22894 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.34□□□□□ -2.03
MMP8P22894 TOMM22P2-201ENST00000430735 237 ntBASIC2.34□□□□□ -2.03
MMP8P22894 MTCO1P44-201ENST00000441935 243 ntBASIC2.34□□□□□ -2.03
MMP8P22894 NDUFB4P10-201ENST00000452541 359 ntBASIC2.34□□□□□ -2.03
MMP8P22894 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.34□□□□□ -2.03
MMP8P22894 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
MMP8P22894 RNU6-496P-201ENST00000516145 99 ntBASIC2.34□□□□□ -2.03
MMP8P22894 AC022441.3-201ENST00000605737 136 ntBASIC2.34□□□□□ -2.03
MMP8P22894 U4.1-201ENST00000620349 87 ntBASIC2.34□□□□□ -2.03
MMP8P22894 snoZ196.1-201ENST00000625269 89 ntBASIC2.34□□□□□ -2.03
MMP8P22894 IGHVIII-44-202ENST00000636235 289 ntBASIC2.34□□□□□ -2.03
MMP8P22894 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.34□□□□□ -2.03
MMP8P22894 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
MMP8P22894 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.04
MMP8P22894 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MMP8P22894 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
MMP8P22894 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
MMP8P22894 MIR410-201ENST00000362222 80 ntBASIC2.33□□□□□ -2.04
MMP8P22894 Y_RNA.193-201ENST00000363979 102 ntBASIC2.33□□□□□ -2.04
MMP8P22894 SNORD114-6-201ENST00000364393 72 ntBASIC2.33□□□□□ -2.04
MMP8P22894 AC074290.1-201ENST00000448883 135 ntBASIC2.33□□□□□ -2.04
MMP8P22894 HSPE1P25-201ENST00000455484 251 ntBASIC2.33□□□□□ -2.04
MMP8P22894 TRBVB-201ENST00000477100 408 ntBASIC2.33□□□□□ -2.04
MMP8P22894 SEPT14P8-201ENST00000508026 178 ntBASIC2.33□□□□□ -2.04
MMP8P22894 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
MMP8P22894 RNU1-104P-201ENST00000517280 175 ntBASIC2.33□□□□□ -2.04
MMP8P22894 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
MMP8P22894 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.33□□□□□ -2.04
MMP8P22894 MIR3126-201ENST00000577443 74 ntBASIC2.33□□□□□ -2.04
MMP8P22894 AC008749.1-201ENST00000597650 306 ntBASIC2.33□□□□□ -2.04
MMP8P22894 SNORD113-5-201ENST00000607261 78 ntBASIC2.33□□□□□ -2.04
MMP8P22894 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MMP8P22894 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MMP8P22894 SNORD81.1-201ENST00000363064 77 ntBASIC2.32□□□□□ -2.04
MMP8P22894 RNA5SP126-201ENST00000365092 109 ntBASIC2.32□□□□□ -2.04
MMP8P22894 Y_RNA.581-201ENST00000391017 97 ntBASIC2.32□□□□□ -2.04
MMP8P22894 RNU2-54P-201ENST00000410299 190 ntBASIC2.32□□□□□ -2.04
MMP8P22894 RNU6-1203P-201ENST00000410703 110 ntBASIC2.32□□□□□ -2.04
MMP8P22894 RNU4-53P-201ENST00000410828 140 ntBASIC2.32□□□□□ -2.04
MMP8P22894 AC007064.1-201ENST00000412238 351 ntBASIC2.32□□□□□ -2.04
MMP8P22894 SRIP3-201ENST00000413200 219 ntBASIC2.32□□□□□ -2.04
MMP8P22894 RPL23AP36-201ENST00000413895 458 ntBASIC2.32□□□□□ -2.04
MMP8P22894 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.32□□□□□ -2.04
MMP8P22894 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.32□□□□□ -2.04
MMP8P22894 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
MMP8P22894 RNU2-12P-201ENST00000517216 168 ntBASIC2.32□□□□□ -2.04
MMP8P22894 AC027419.1-201ENST00000522976 328 ntBASIC2.32□□□□□ -2.04
MMP8P22894 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.32□□□□□ -2.04
MMP8P22894 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
MMP8P22894 RNU6-324P-201ENST00000363957 106 ntBASIC2.31□□□□□ -2.04
MMP8P22894 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
MMP8P22894 Y_RNA.452-201ENST00000384202 108 ntBASIC2.31□□□□□ -2.04
MMP8P22894 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
MMP8P22894 AC096920.1-201ENST00000423991 241 ntBASIC2.31□□□□□ -2.04
MMP8P22894 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP8P22894 AC005042.3-201ENST00000453230 174 ntBASIC2.31□□□□□ -2.04
MMP8P22894 RNU6-221P-201ENST00000459541 99 ntBASIC2.31□□□□□ -2.04
MMP8P22894 SCARNA24.2-201ENST00000516968 130 ntBASIC2.31□□□□□ -2.04
MMP8P22894 DEFB108E-201ENST00000524692 240 ntBASIC2.31□□□□□ -2.04
MMP8P22894 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP8P22894 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.31□□□□□ -2.04
MMP8P22894 MIR5194-201ENST00000582634 120 ntBASIC2.31□□□□□ -2.04
MMP8P22894 AC006380.1-201ENST00000603598 186 ntBASIC2.31□□□□□ -2.04
MMP8P22894 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MMP8P22894 RNU6-702P-201ENST00000364982 107 ntBASIC2.3□□□□□ -2.04
MMP8P22894 RNU6-1235P-201ENST00000384559 107 ntBASIC2.3□□□□□ -2.04
MMP8P22894 EDDM3CP-201ENST00000415977 425 ntBASIC2.3□□□□□ -2.04
MMP8P22894 AL390729.2-201ENST00000416137 156 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms