Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR4724-201ENST00000579485 89 ntBASIC2.92□□□□□ -1.94
ATF4P18848 MIR4444-1-201ENST00000581696 74 ntBASIC2.92□□□□□ -1.94
ATF4P18848 MIR4444-2-201ENST00000584390 74 ntBASIC2.92□□□□□ -1.94
ATF4P18848 AC072026.1-201ENST00000605023 201 ntBASIC2.92□□□□□ -1.94
ATF4P18848 YPEL5P2-201ENST00000605553 359 ntBASIC2.92□□□□□ -1.94
ATF4P18848 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.92□□□□□ -1.94
ATF4P18848 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
ATF4P18848 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATF4P18848 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATF4P18848 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ATF4P18848 Y_RNA.270-201ENST00000364693 104 ntBASIC2.91□□□□□ -1.94
ATF4P18848 SNORA8-201ENST00000384574 139 ntBASIC2.91□□□□□ -1.94
ATF4P18848 MIR562-201ENST00000384894 95 ntBASIC2.91□□□□□ -1.94
ATF4P18848 MIR199A2-201ENST00000385289 110 ntBASIC2.91□□□□□ -1.94
ATF4P18848 RNA5SP465-201ENST00000391195 109 ntBASIC2.91□□□□□ -1.94
ATF4P18848 AL117342.1-201ENST00000404861 406 ntBASIC2.91□□□□□ -1.94
ATF4P18848 RN7SKP156-201ENST00000410308 342 ntBASIC2.91□□□□□ -1.94
ATF4P18848 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.91□□□□□ -1.94
ATF4P18848 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.91□□□□□ -1.94
ATF4P18848 RNU7-94P-201ENST00000459576 63 ntBASIC2.91□□□□□ -1.94
ATF4P18848 AC091153.1-201ENST00000466297 402 ntBASIC2.91□□□□□ -1.94
ATF4P18848 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.91□□□□□ -1.94
ATF4P18848 AC022695.1-201ENST00000522089 237 ntBASIC2.91□□□□□ -1.94
ATF4P18848 AC100767.1-201ENST00000528178 123 ntBASIC2.91□□□□□ -1.94
ATF4P18848 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.91□□□□□ -1.94
ATF4P18848 MIR92B-201ENST00000607575 96 ntBASIC2.91□□□□□ -1.94
ATF4P18848 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.91□□□□□ -1.94
ATF4P18848 MIR6500-201ENST00000622700 86 ntBASIC2.91□□□□□ -1.94
ATF4P18848 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.91□□□□□ -1.94
ATF4P18848 AL359837.1-201ENST00000381357 287 ntBASIC2.9□□□□□ -1.95
ATF4P18848 MIR200C-201ENST00000384980 68 ntBASIC2.9□□□□□ -1.95
ATF4P18848 MIR526A2-201ENST00000390198 65 ntBASIC2.9□□□□□ -1.95
ATF4P18848 TBCAP1-201ENST00000436520 327 ntBASIC2.9□□□□□ -1.95
ATF4P18848 RNU7-120P-201ENST00000459334 63 ntBASIC2.9□□□□□ -1.95
ATF4P18848 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.9□□□□□ -1.95
ATF4P18848 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.9□□□□□ -1.95
ATF4P18848 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.9□□□□□ -1.95
ATF4P18848 AL354798.1-201ENST00000622505 329 ntBASIC2.9□□□□□ -1.95
ATF4P18848 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATF4P18848 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATF4P18848 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
ATF4P18848 MIR518A2-201ENST00000384966 87 ntBASIC2.89□□□□□ -1.95
ATF4P18848 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ATF4P18848 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.89□□□□□ -1.95
ATF4P18848 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.89□□□□□ -1.95
ATF4P18848 COX6CP10-201ENST00000416832 224 ntBASIC2.89□□□□□ -1.95
ATF4P18848 RNU6-437P-201ENST00000459408 95 ntBASIC2.89□□□□□ -1.95
ATF4P18848 RN7SL542P-201ENST00000467147 294 ntBASIC2.89□□□□□ -1.95
ATF4P18848 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.89□□□□□ -1.95
ATF4P18848 RNA5SP208-201ENST00000516156 78 ntBASIC2.89□□□□□ -1.95
ATF4P18848 SNORA70.19-201ENST00000516717 90 ntBASIC2.89□□□□□ -1.95
ATF4P18848 AC021269.2-201ENST00000532318 330 ntBASIC2.89□□□□□ -1.95
ATF4P18848 YPEL5P3-201ENST00000547227 352 ntBASIC2.89□□□□□ -1.95
ATF4P18848 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.89□□□□□ -1.95
ATF4P18848 MIR4429-201ENST00000580105 73 ntBASIC2.89□□□□□ -1.95
ATF4P18848 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.89□□□□□ -1.95
ATF4P18848 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATF4P18848 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATF4P18848 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ATF4P18848 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATF4P18848 Y_RNA.7-201ENST00000362352 102 ntBASIC2.88□□□□□ -1.95
ATF4P18848 RNU1-52P-201ENST00000384190 164 ntBASIC2.88□□□□□ -1.95
ATF4P18848 MIR626-201ENST00000385032 94 ntBASIC2.88□□□□□ -1.95
ATF4P18848 RNA5SP424-201ENST00000390988 115 ntBASIC2.88□□□□□ -1.95
ATF4P18848 HMGN2P39-201ENST00000398005 273 ntBASIC2.88□□□□□ -1.95
ATF4P18848 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.88□□□□□ -1.95
ATF4P18848 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
ATF4P18848 RNU6-1096P-201ENST00000517089 102 ntBASIC2.88□□□□□ -1.95
ATF4P18848 SNORD14A-201ENST00000606526 91 ntBASIC2.88□□□□□ -1.95
ATF4P18848 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
ATF4P18848 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.88□□□□□ -1.95
ATF4P18848 AC022149.2-201ENST00000621061 203 ntBASIC2.88□□□□□ -1.95
ATF4P18848 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.88□□□□□ -1.95
ATF4P18848 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ATF4P18848 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.88□□□□□ -1.95
ATF4P18848 AC018630.2-201ENST00000534866 2403 ntBASIC2.88□□□□□ -1.95
ATF4P18848 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATF4P18848 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.88□□□□□ -1.95
ATF4P18848 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATF4P18848 Y_RNA.24-201ENST00000362508 103 ntBASIC2.87□□□□□ -1.95
ATF4P18848 RNU6-47P-201ENST00000383866 107 ntBASIC2.87□□□□□ -1.95
ATF4P18848 RNU4-70P-201ENST00000384579 139 ntBASIC2.87□□□□□ -1.95
ATF4P18848 RNU6-918P-201ENST00000391219 106 ntBASIC2.87□□□□□ -1.95
ATF4P18848 SNORA3.3-201ENST00000408712 125 ntBASIC2.87□□□□□ -1.95
ATF4P18848 RPS4XP11-201ENST00000446897 772 ntBASIC2.87□□□□□ -1.95
ATF4P18848 AC021205.2-201ENST00000480069 347 ntBASIC2.87□□□□□ -1.95
ATF4P18848 FCF1P8-201ENST00000510322 597 ntBASIC2.87□□□□□ -1.95
ATF4P18848 AC107393.1-201ENST00000512403 346 ntBASIC2.87□□□□□ -1.95
ATF4P18848 RN7SKP164-201ENST00000516138 266 ntBASIC2.87□□□□□ -1.95
ATF4P18848 AC023632.4-201ENST00000517783 191 ntBASIC2.87□□□□□ -1.95
ATF4P18848 AC011604.1-201ENST00000545978 196 ntBASIC2.87□□□□□ -1.95
ATF4P18848 AL161756.2-201ENST00000604597 246 ntBASIC2.87□□□□□ -1.95
ATF4P18848 FTX_2.1-201ENST00000618816 94 ntBASIC2.87□□□□□ -1.95
ATF4P18848 MIR6733-201ENST00000635723 61 ntBASIC2.87□□□□□ -1.95
ATF4P18848 MIR6079-201ENST00000635807 62 ntBASIC2.87□□□□□ -1.95
ATF4P18848 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATF4P18848 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATF4P18848 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ATF4P18848 RNU4-10P-201ENST00000364383 140 ntBASIC2.86□□□□□ -1.95
ATF4P18848 Y_RNA.233-201ENST00000364407 101 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms