Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
ERCC2P18074 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.65□□□□□ -2.15
ERCC2P18074 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.65□□□□□ -2.15
ERCC2P18074 U6.108-201ENST00000637764 58 ntBASIC1.65□□□□□ -2.15
ERCC2P18074 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ERCC2P18074 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ERCC2P18074 RNU6-1266P-201ENST00000362794 105 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 Y_RNA.142-201ENST00000363491 102 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 RNU6-1188P-201ENST00000363795 107 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 Y_RNA.646-201ENST00000410980 101 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 HSPE1P24-201ENST00000450782 238 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 AC027575.1-201ENST00000481064 460 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 RPL17P19-201ENST00000489069 552 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 RNU6-120P-201ENST00000516077 103 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 RNU1-142P-201ENST00000516682 145 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 APOOP3-201ENST00000536787 586 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 AC004584.2-201ENST00000570407 410 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 MIR4801-201ENST00000582704 82 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.64□□□□□ -2.15
ERCC2P18074 UBE2V2P2-201ENST00000587677 504 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 AC113139.1-201ENST00000605049 239 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 AL359075.3-201ENST00000613288 217 ntBASIC1.64□□□□□ -2.15
ERCC2P18074 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ERCC2P18074 RNA5SP361-201ENST00000362686 118 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 RNU4-42P-201ENST00000364738 142 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 Y_RNA.358-201ENST00000365491 99 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 RNU6-203P-201ENST00000384038 104 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 RNU6-310P-201ENST00000384655 107 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 MIR764-201ENST00000390811 85 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 RNA5SP109-201ENST00000391010 116 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 Y_RNA.595-201ENST00000410403 105 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 COX6CP10-201ENST00000416832 224 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 AC005002.2-201ENST00000438228 269 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.63□□□□□ -2.15
ERCC2P18074 RNU6-559P-201ENST00000516151 98 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 AC022432.1-201ENST00000595739 310 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 MIR1244-1-201ENST00000612829 85 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 MIR1244-3-201ENST00000635744 85 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 MIR1244-2-201ENST00000636449 85 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 MIR1244-4-202ENST00000636813 85 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.63□□□□□ -2.15
ERCC2P18074 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
ERCC2P18074 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ERCC2P18074 RNU6-271P-201ENST00000363858 105 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 RNU6-879P-201ENST00000364328 108 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 RNU6-99P-201ENST00000364721 107 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.62□□□□□ -2.15
ERCC2P18074 RNU6-1145P-201ENST00000384246 107 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 RNU6-1186P-201ENST00000410429 97 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 AL606517.2-201ENST00000442855 241 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 UQCRBP2-201ENST00000447827 297 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 SNORD65B-201ENST00000459126 73 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 AC022868.1-201ENST00000517767 391 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 AL137100.2-201ENST00000555786 315 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 MIR5690-201ENST00000583739 73 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 AL357075.2-201ENST00000614906 189 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 MIR8063-201ENST00000621930 81 ntBASIC1.62□□□□□ -2.15
ERCC2P18074 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ERCC2P18074 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
ERCC2P18074 RPL21P1-201ENST00000399532 476 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 TOMM22P2-201ENST00000430735 237 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.61□□□□□ -2.15
ERCC2P18074 UBE2V1P7-201ENST00000446395 340 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 RPS27P1-201ENST00000450552 247 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 RNU6-277P-201ENST00000516272 106 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.61□□□□□ -2.15
ERCC2P18074 CYCSP23-201ENST00000519781 313 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 AC027419.1-201ENST00000522976 328 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 MIR4709-201ENST00000577272 72 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 U6.73-201ENST00000619194 103 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 ICE2P2-201ENST00000483823 2787 ntBASIC1.61□□□□□ -2.15
ERCC2P18074 RNU6-890P-201ENST00000384121 107 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 SNORA75.6-201ENST00000391318 127 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 ELOCP21-201ENST00000412558 336 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 AL161935.2-201ENST00000414627 60 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.6□□□□□ -2.15
ERCC2P18074 RPL30P15-201ENST00000457129 321 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 RPS26P45-201ENST00000471748 340 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 AC091951.2-201ENST00000500762 203 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.6□□□□□ -2.15
ERCC2P18074 AC022493.2-201ENST00000506122 481 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 RNU7-128P-201ENST00000517247 62 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ERCC2P18074 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 AC104260.1-201ENST00000616660 539 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
ERCC2P18074 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ERCC2P18074 Y_RNA.67-201ENST00000362870 100 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 RNU6-1297P-201ENST00000384415 104 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 RNU6-482P-201ENST00000391068 107 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 RNU1-78P-201ENST00000391248 165 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.59□□□□□ -2.15
ERCC2P18074 MTCO3P10-201ENST00000455912 772 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 MIR2053-201ENST00000459295 91 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 RNU7-34P-201ENST00000459394 64 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 RNU6-264P-201ENST00000517134 104 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms