Protein–RNA interactions for Protein: P17029

ZKSCAN1, Zinc finger protein with KRAB and SCAN domains 1, humanhuman

Predicted RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1P17029 AC131281.1-201ENST00000522984 164 ntBASIC2.58□□□□□ -2
ZKSCAN1P17029 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.58□□□□□ -2
ZKSCAN1P17029 AC087441.2-201ENST00000529141 262 ntBASIC2.58□□□□□ -2
ZKSCAN1P17029 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.58□□□□□ -2
ZKSCAN1P17029 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
ZKSCAN1P17029 Y_RNA.772-201ENST00000606692 102 ntBASIC2.58□□□□□ -2
ZKSCAN1P17029 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.58□□□□□ -2
ZKSCAN1P17029 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.58□□□□□ -2
ZKSCAN1P17029 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.58□□□□□ -2
ZKSCAN1P17029 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ZKSCAN1P17029 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ZKSCAN1P17029 U3.8-201ENST00000363675 217 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 Y_RNA.439-201ENST00000384119 94 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 RNU6-975P-201ENST00000384296 105 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 RNU6-160P-201ENST00000384591 107 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 HMGN2P39-201ENST00000398005 273 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 MIR548F4-201ENST00000408515 105 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 AL358176.2-201ENST00000425769 204 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 AC114982.1-201ENST00000469402 321 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 HMGB3P3-201ENST00000510526 400 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 RNU6-1046P-201ENST00000516538 107 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 RNU7-193P-201ENST00000516723 65 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 MIR6895-201ENST00000613497 78 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 AC130454.1-201ENST00000622948 401 ntBASIC2.57□□□□□ -2
ZKSCAN1P17029 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
ZKSCAN1P17029 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.56□□□□□ -2
ZKSCAN1P17029 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ZKSCAN1P17029 MIR340-201ENST00000362125 95 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 Y_RNA.183-201ENST00000363882 113 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 Y_RNA.214-201ENST00000364201 112 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 Y_RNA.459-201ENST00000384251 102 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 Y_RNA.498-201ENST00000384460 102 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 MIR144-201ENST00000384886 86 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 MTCO1P44-201ENST00000441935 243 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 RNU6-625P-201ENST00000459412 107 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 Y_RNA.713-201ENST00000517013 96 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 AL117187.1-201ENST00000555482 181 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 MIR4529-201ENST00000578110 78 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.56□□□□□ -2
ZKSCAN1P17029 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZKSCAN1P17029 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
ZKSCAN1P17029 RNU6-626P-201ENST00000363354 107 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 Y_RNA.152-201ENST00000363578 100 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 Y_RNA.210-201ENST00000364161 110 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 SNORA67.3-201ENST00000384366 140 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 RPL21P1-201ENST00000399532 476 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 ELOCP20-201ENST00000422460 345 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 RAB28P5-201ENST00000427490 651 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.55□□□□□ -2
ZKSCAN1P17029 MRPS35P2-201ENST00000508242 191 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.55□□□□□ -2
ZKSCAN1P17029 AP002001.1-203ENST00000534002 267 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 AC078899.2-201ENST00000595282 212 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
ZKSCAN1P17029 MIR219B-201ENST00000637023 88 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.55□□□□□ -2
ZKSCAN1P17029 AC009487.4-201ENST00000624969 3585 ntBASIC2.55□□□□□ -2
ZKSCAN1P17029 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZKSCAN1P17029 Y_RNA.133-201ENST00000363428 110 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 RNU6-1264P-201ENST00000383891 107 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 RNU6-20P-201ENST00000384106 107 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 SNORD63-201ENST00000384262 68 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 MIR518A2-201ENST00000384966 87 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 snosnR66.1-201ENST00000391095 99 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 RNU6-1109P-201ENST00000391187 107 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 SNORD23.1-201ENST00000408212 104 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.54□□□□□ -2
ZKSCAN1P17029 RNU7-57P-201ENST00000459540 60 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 MTATP8P1-201ENST00000467115 207 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 RNU6-397P-201ENST00000516226 104 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 RNU6-948P-201ENST00000516374 107 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 SNORA31.25-201ENST00000517242 134 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.54□□□□□ -2
ZKSCAN1P17029 MIR4423-201ENST00000580922 80 ntBASIC2.54□□□□□ -2
ZKSCAN1P17029 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.54□□□□□ -2
ZKSCAN1P17029 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZKSCAN1P17029 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZKSCAN1P17029 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
ZKSCAN1P17029 LINC02555-201ENST00000563933 1951 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 Y_RNA.238-201ENST00000364441 102 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 RNU6-418P-201ENST00000384035 107 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 RNU6-1105P-201ENST00000384774 107 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZKSCAN1P17029 MIR1185-2-201ENST00000408687 86 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZKSCAN1P17029 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.53□□□□□ -2
ZKSCAN1P17029 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.53□□□□□ -2
ZKSCAN1P17029 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.53□□□□□ -2
ZKSCAN1P17029 AC055872.1-201ENST00000570978 278 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 AC136932.1-201ENST00000574771 208 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 MIR5002-201ENST00000584713 97 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
ZKSCAN1P17029 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
ZKSCAN1P17029 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ZKSCAN1P17029 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms