Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SNX2P2-201ENST00000424553 323 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 U8.22-201ENST00000459141 133 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 RPL31P58-201ENST00000469001 379 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 MTND4P17-201ENST00000470444 350 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 AC099513.1-201ENST00000490423 301 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 RNA5SP182-201ENST00000516064 82 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 AL357075.2-201ENST00000614906 189 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 AC073544.1-201ENST00000600110 1595 ntBASIC2.22□□□□□ -2.05
HMGB1P09429 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGB1P09429 RNU6-1123P-201ENST00000362347 106 ntBASIC2.21□□□□□ -2.06
HMGB1P09429 RNU6-1264P-201ENST00000383891 107 ntBASIC2.21□□□□□ -2.06
HMGB1P09429 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGB1P09429 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGB1P09429 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGB1P09429 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGB1P09429 AC073413.2-201ENST00000604332 360 ntBASIC2.21□□□□□ -2.06
HMGB1P09429 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.21□□□□□ -2.06
HMGB1P09429 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
HMGB1P09429 RNU2-20P-201ENST00000410425 191 ntBASIC2.2□□□□□ -2.06
HMGB1P09429 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGB1P09429 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGB1P09429 RNU7-94P-201ENST00000459576 63 ntBASIC2.2□□□□□ -2.06
HMGB1P09429 RPL17P19-201ENST00000489069 552 ntBASIC2.2□□□□□ -2.06
HMGB1P09429 RPL23AP94-201ENST00000512518 302 ntBASIC2.2□□□□□ -2.06
HMGB1P09429 RNU1-41P-201ENST00000516161 162 ntBASIC2.2□□□□□ -2.06
HMGB1P09429 RNU1-48P-201ENST00000516400 162 ntBASIC2.2□□□□□ -2.06
HMGB1P09429 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HMGB1P09429 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 RNA5SP126-201ENST00000365092 109 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 RNU6-407P-201ENST00000365280 104 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 RNU6-1145P-201ENST00000384246 107 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 MT-TL1-201ENST00000386347 75 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 PCNPP5-201ENST00000452246 481 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 RN7SL274P-201ENST00000492268 272 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 SUB1P3-201ENST00000564581 315 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 PRR13P7-201ENST00000605538 430 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 AC006435.5-201ENST00000624486 112 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 AL669831.3-213ENST00000636676 183 ntBASIC2.19□□□□□ -2.06
HMGB1P09429 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HMGB1P09429 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB1P09429 SNORA20B-201ENST00000384220 132 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 AL034345.1-201ENST00000407768 123 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 ELOCP21-201ENST00000412558 336 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGB1P09429 MTND1P2-201ENST00000430604 821 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 Y_RNA.635-201ENST00000459041 101 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 AC116353.2-201ENST00000505332 712 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 RNU7-172P-201ENST00000517125 64 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGB1P09429 AC018448.1-201ENST00000552843 316 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGB1P09429 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.18□□□□□ -2.06
HMGB1P09429 AC018630.2-201ENST00000534866 2403 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 RNU6-99P-201ENST00000364721 107 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 Y_RNA.279-201ENST00000364763 95 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 MTCYBP4-201ENST00000401524 249 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 Y_RNA.599-201ENST00000410489 109 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 MIR2053-201ENST00000459295 91 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB1P09429 RPL21P9-201ENST00000556149 474 ntBASIC2.17□□□□□ -2.06
HMGB1P09429 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HMGB1P09429 MIR26B-201ENST00000362251 77 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 AL355796.1-201ENST00000406706 323 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 RNU4-14P-201ENST00000410858 122 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 AC114482.1-201ENST00000418010 247 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 RPL30P13-201ENST00000418873 348 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 RPS29P23-201ENST00000458635 123 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 RNU6-625P-201ENST00000459412 107 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 AC074133.1-201ENST00000515696 183 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 TPTEP1-208ENST00000636884 213 ntBASIC2.16□□□□□ -2.06
HMGB1P09429 RNA5SP475-201ENST00000410568 110 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 RNU6-370P-201ENST00000411008 104 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.15□□□□□ -2.07
HMGB1P09429 STAG3L5P-204ENST00000443759 179 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 PGBD4P5-201ENST00000445958 426 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 AC097462.1-201ENST00000514125 324 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 RN7SKP49-201ENST00000516675 260 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 AC110588.1-201ENST00000559699 137 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 CYP3A52P-201ENST00000563326 91 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 AC016727.1-205ENST00000605437 569 ntBASIC2.15□□□□□ -2.07
HMGB1P09429 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HMGB1P09429 Y_RNA.505-201ENST00000384489 102 ntBASIC2.14□□□□□ -2.07
HMGB1P09429 RNU6-264P-201ENST00000517134 104 ntBASIC2.14□□□□□ -2.07
HMGB1P09429 AL359757.2-201ENST00000624309 274 ntBASIC2.14□□□□□ -2.07
HMGB1P09429 SNORD3E-202ENST00000627253 216 ntBASIC2.14□□□□□ -2.07
HMGB1P09429 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HMGB1P09429 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HMGB1P09429 RNU6-1304P-201ENST00000411374 106 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 MTCO3P19-201ENST00000415864 321 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 PDCL2P1-201ENST00000419302 352 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 UBL5P3-201ENST00000475112 231 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGB1P09429 SNORA40.9-201ENST00000515895 93 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 RNA5SP20-201ENST00000515976 84 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.13□□□□□ -2.07
HMGB1P09429 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGB1P09429 MIR4419B-201ENST00000577260 68 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms