Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 AP002001.1-203ENST00000534002 267 ntBASIC1.85□□□□□ -2.11
NGFP01138 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.85□□□□□ -2.11
NGFP01138 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.85□□□□□ -2.11
NGFP01138 AC008737.2-201ENST00000599446 118 ntBASIC1.85□□□□□ -2.11
NGFP01138 AC005034.5-201ENST00000604219 466 ntBASIC1.85□□□□□ -2.11
NGFP01138 AC025754.2-201ENST00000606491 432 ntBASIC1.85□□□□□ -2.11
NGFP01138 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.85□□□□□ -2.11
NGFP01138 snoZ196.1-201ENST00000625269 89 ntBASIC1.85□□□□□ -2.11
NGFP01138 MIR3674-201ENST00000636576 68 ntBASIC1.85□□□□□ -2.11
NGFP01138 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NGFP01138 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NGFP01138 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.84□□□□□ -2.11
NGFP01138 RNU6-626P-201ENST00000363354 107 ntBASIC1.84□□□□□ -2.11
NGFP01138 Y_RNA.152-201ENST00000363578 100 ntBASIC1.84□□□□□ -2.11
NGFP01138 RNU6-1164P-201ENST00000364428 107 ntBASIC1.84□□□□□ -2.11
NGFP01138 RNU6-20P-201ENST00000384106 107 ntBASIC1.84□□□□□ -2.11
NGFP01138 SNORA48.3-201ENST00000391081 134 ntBASIC1.84□□□□□ -2.11
NGFP01138 RPL21P1-201ENST00000399532 476 ntBASIC1.84□□□□□ -2.11
NGFP01138 AL023284.1-201ENST00000403956 276 ntBASIC1.84□□□□□ -2.11
NGFP01138 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.84□□□□□ -2.11
NGFP01138 AL358176.2-201ENST00000425769 204 ntBASIC1.84□□□□□ -2.11
NGFP01138 HMGN2P3-201ENST00000433603 273 ntBASIC1.84□□□□□ -2.11
NGFP01138 HMGN2P5-201ENST00000436882 273 ntBASIC1.84□□□□□ -2.11
NGFP01138 AC005002.2-201ENST00000438228 269 ntBASIC1.84□□□□□ -2.11
NGFP01138 AC245102.2-201ENST00000448956 180 ntBASIC1.84□□□□□ -2.11
NGFP01138 Y_RNA.638-201ENST00000459374 113 ntBASIC1.84□□□□□ -2.11
NGFP01138 AC108210.2-201ENST00000503681 201 ntBASIC1.84□□□□□ -2.11
NGFP01138 AC107222.1-201ENST00000510899 637 ntBASIC1.84□□□□□ -2.11
NGFP01138 RNA5SP82-201ENST00000516707 92 ntBASIC1.84□□□□□ -2.11
NGFP01138 RNU6-856P-201ENST00000516959 98 ntBASIC1.84□□□□□ -2.11
NGFP01138 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.84□□□□□ -2.11
NGFP01138 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.84□□□□□ -2.11
NGFP01138 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.84□□□□□ -2.11
NGFP01138 AL117187.1-201ENST00000555482 181 ntBASIC1.84□□□□□ -2.11
NGFP01138 AC015712.3-201ENST00000559380 164 ntBASIC1.84□□□□□ -2.11
NGFP01138 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
NGFP01138 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
NGFP01138 PRR13P7-201ENST00000605538 430 ntBASIC1.84□□□□□ -2.11
NGFP01138 AC022202.1-201ENST00000613515 211 ntBASIC1.84□□□□□ -2.11
NGFP01138 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
NGFP01138 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.84□□□□□ -2.11
NGFP01138 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NGFP01138 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.84□□□□□ -2.12
NGFP01138 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NGFP01138 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NGFP01138 RNU6-418P-201ENST00000384035 107 ntBASIC1.83□□□□□ -2.12
NGFP01138 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
NGFP01138 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
NGFP01138 SNORA80E-201ENST00000384744 137 ntBASIC1.83□□□□□ -2.12
NGFP01138 Y_RNA.570-201ENST00000384750 101 ntBASIC1.83□□□□□ -2.12
NGFP01138 MIR29C-201ENST00000385231 88 ntBASIC1.83□□□□□ -2.12
NGFP01138 SNORA40.19-201ENST00000390846 128 ntBASIC1.83□□□□□ -2.12
NGFP01138 RNU6-1109P-201ENST00000391187 107 ntBASIC1.83□□□□□ -2.12
NGFP01138 ELOCP20-201ENST00000422460 345 ntBASIC1.83□□□□□ -2.12
NGFP01138 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.83□□□□□ -2.12
NGFP01138 IPO7P1-201ENST00000442031 636 ntBASIC1.83□□□□□ -2.12
NGFP01138 AL139109.1-201ENST00000455491 297 ntBASIC1.83□□□□□ -2.12
NGFP01138 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.83□□□□□ -2.12
NGFP01138 AC025465.3-201ENST00000510570 311 ntBASIC1.83□□□□□ -2.12
NGFP01138 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.83□□□□□ -2.12
NGFP01138 AC055872.1-201ENST00000570978 278 ntBASIC1.83□□□□□ -2.12
NGFP01138 MIR3684-201ENST00000579779 74 ntBASIC1.83□□□□□ -2.12
NGFP01138 MIR5694-201ENST00000581190 76 ntBASIC1.83□□□□□ -2.12
NGFP01138 AL109918.3-201ENST00000603072 338 ntBASIC1.83□□□□□ -2.12
NGFP01138 SNORD14A-201ENST00000606526 91 ntBASIC1.83□□□□□ -2.12
NGFP01138 LINC02555-201ENST00000563933 1951 ntBASIC1.83□□□□□ -2.12
NGFP01138 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
NGFP01138 Y_RNA.133-201ENST00000363428 110 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU6-770P-201ENST00000363929 105 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU6-454P-201ENST00000364292 107 ntBASIC1.82□□□□□ -2.12
NGFP01138 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU6-160P-201ENST00000384591 107 ntBASIC1.82□□□□□ -2.12
NGFP01138 SNORD115-46-201ENST00000390982 71 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU6-482P-201ENST00000391068 107 ntBASIC1.82□□□□□ -2.12
NGFP01138 MIR1289-2-201ENST00000408360 111 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNA5SP475-201ENST00000410568 110 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU5A-5P-201ENST00000411054 116 ntBASIC1.82□□□□□ -2.12
NGFP01138 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.82□□□□□ -2.12
NGFP01138 AL390729.2-201ENST00000416137 156 ntBASIC1.82□□□□□ -2.12
NGFP01138 AL591806.2-201ENST00000433122 173 ntBASIC1.82□□□□□ -2.12
NGFP01138 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.82□□□□□ -2.12
NGFP01138 AC016717.1-201ENST00000448918 286 ntBASIC1.82□□□□□ -2.12
NGFP01138 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
NGFP01138 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.82□□□□□ -2.12
NGFP01138 MRPS35P2-201ENST00000508242 191 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU6-1143P-201ENST00000516125 104 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU6-1046P-201ENST00000516538 107 ntBASIC1.82□□□□□ -2.12
NGFP01138 RNU2-12P-201ENST00000517216 168 ntBASIC1.82□□□□□ -2.12
NGFP01138 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.82□□□□□ -2.12
NGFP01138 AC136932.1-201ENST00000574771 208 ntBASIC1.82□□□□□ -2.12
NGFP01138 AC005176.2-201ENST00000596933 147 ntBASIC1.82□□□□□ -2.12
NGFP01138 AC022441.3-201ENST00000605737 136 ntBASIC1.82□□□□□ -2.12
NGFP01138 AC005828.6-201ENST00000606610 232 ntBASIC1.82□□□□□ -2.12
NGFP01138 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
NGFP01138 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.82□□□□□ -2.12
NGFP01138 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
NGFP01138 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
NGFP01138 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
NGFP01138 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NGFP01138 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms