Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL355297.3-201ENST00000604082 446 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 AC022202.1-201ENST00000613515 211 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 MIR6132-201ENST00000622083 109 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 AC008873.1-201ENST00000625051 138 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CLPTM1O96005 Y_RNA.26-201ENST00000362539 101 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 Y_RNA.105-201ENST00000363182 111 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 Y_RNA.143-201ENST00000363520 106 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 SNORD31B-201ENST00000364977 69 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 RNU6-806P-201ENST00000365147 105 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 RNU6-438P-201ENST00000365561 103 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 MIR586-201ENST00000385035 97 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 MIR548F4-201ENST00000408515 105 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.9□□□□□ -2.11
CLPTM1O96005 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.9□□□□□ -2.11
CLPTM1O96005 ELOCP20-201ENST00000422460 345 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.9□□□□□ -2.11
CLPTM1O96005 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.9□□□□□ -2.11
CLPTM1O96005 AC016717.1-201ENST00000448918 286 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 AC016925.1-201ENST00000458303 298 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 RN7SL429P-201ENST00000479090 223 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 RN7SL489P-201ENST00000486185 223 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 RN7SL327P-201ENST00000488659 223 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.9□□□□□ -2.11
CLPTM1O96005 AC055872.1-201ENST00000570978 278 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 MIR4753-201ENST00000585119 83 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 RN7SL853P-201ENST00000617250 223 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.9□□□□□ -2.11
CLPTM1O96005 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CLPTM1O96005 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CLPTM1O96005 U8.2-201ENST00000363156 134 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 Y_RNA.439-201ENST00000384119 94 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 Y_RNA.512-201ENST00000384518 102 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 MIR548B-201ENST00000385247 97 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 MRPL35P1-201ENST00000404272 572 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 MIR1262-201ENST00000408276 93 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 RAB28P5-201ENST00000427490 651 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
CLPTM1O96005 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.89□□□□□ -2.11
CLPTM1O96005 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.89□□□□□ -2.11
CLPTM1O96005 RNU6-635P-201ENST00000516651 102 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.89□□□□□ -2.11
CLPTM1O96005 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.89□□□□□ -2.11
CLPTM1O96005 AC233702.2-202ENST00000562547 291 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 AC136932.1-201ENST00000574771 208 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 Y_RNA.772-201ENST00000606692 102 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.89□□□□□ -2.11
CLPTM1O96005 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.89□□□□□ -2.11
CLPTM1O96005 AC010205.1-201ENST00000616668 449 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CLPTM1O96005 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CLPTM1O96005 ZNF702P-202ENST00000434269 1966 ntBASIC1.89□□□□□ -2.11
CLPTM1O96005 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 SNORD115-3-201ENST00000363100 82 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 Y_RNA.214-201ENST00000364201 112 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 SNORA63.7-201ENST00000365579 123 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 RNU6-418P-201ENST00000384035 107 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 RNU6-20P-201ENST00000384106 107 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 RNU6-937P-201ENST00000384325 106 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 SNORD14D-201ENST00000384390 87 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 Y_RNA.498-201ENST00000384460 102 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 RNU6-1105P-201ENST00000384774 107 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 MIR300-201ENST00000401138 83 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AL135786.1-201ENST00000415892 214 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 EDDM3CP-201ENST00000415977 425 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AL358176.2-201ENST00000425769 204 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AC005002.2-201ENST00000438228 269 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AL137159.1-201ENST00000452808 512 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AC010531.2-201ENST00000465012 153 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AC074133.1-201ENST00000515696 183 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 RNY3P15-201ENST00000516297 97 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 SNORA40.15-201ENST00000516884 107 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.88□□□□□ -2.11
CLPTM1O96005 NDUFA5P6-201ENST00000542110 379 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AL117187.1-201ENST00000555482 181 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AC008269.2-201ENST00000561915 1105 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.88□□□□□ -2.11
CLPTM1O96005 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.88□□□□□ -2.11
CLPTM1O96005 RNU6-238P-201ENST00000363313 106 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 RNU6-626P-201ENST00000363354 107 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 SNORA70B-201ENST00000384210 135 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 RPL21P1-201ENST00000399532 476 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 RNU6-121P-201ENST00000410525 99 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.87□□□□□ -2.11
CLPTM1O96005 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 AC139712.2-201ENST00000424302 339 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.87□□□□□ -2.11
CLPTM1O96005 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLPTM1O96005 AC073910.1-201ENST00000445047 438 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms