Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 HMGB3P17-201ENST00000504195 649 ntBASIC2.01□□□□□ -2.09
DDX58O95786 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.01□□□□□ -2.09
DDX58O95786 MIR4303-201ENST00000581299 66 ntBASIC2.01□□□□□ -2.09
DDX58O95786 BX248123.2-201ENST00000606318 124 ntBASIC2.01□□□□□ -2.09
DDX58O95786 Y_RNA.804-201ENST00000615262 101 ntBASIC2.01□□□□□ -2.09
DDX58O95786 AC126177.8-201ENST00000618339 1015 ntBASIC2.01□□□□□ -2.09
DDX58O95786 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
DDX58O95786 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2□□□□□ -2.09
DDX58O95786 Y_RNA.70-201ENST00000362886 110 ntBASIC2□□□□□ -2.09
DDX58O95786 RNU6-112P-201ENST00000363599 104 ntBASIC2□□□□□ -2.09
DDX58O95786 U3.8-201ENST00000363675 217 ntBASIC2□□□□□ -2.09
DDX58O95786 RNU6-1019P-201ENST00000364424 107 ntBASIC2□□□□□ -2.09
DDX58O95786 MIR625-201ENST00000385047 85 ntBASIC2□□□□□ -2.09
DDX58O95786 RNU6-1156P-201ENST00000410365 100 ntBASIC2□□□□□ -2.09
DDX58O95786 RNU6-1001P-201ENST00000411265 100 ntBASIC2□□□□□ -2.09
DDX58O95786 MTCO2P27-201ENST00000420740 428 ntBASIC2□□□□□ -2.09
DDX58O95786 AC008134.1-201ENST00000420943 193 ntBASIC2□□□□□ -2.09
DDX58O95786 MTND4LP11-201ENST00000422184 280 ntBASIC2□□□□□ -2.09
DDX58O95786 EIF1P2-201ENST00000428233 350 ntBASIC2□□□□□ -2.09
DDX58O95786 AC099677.2-201ENST00000436385 175 ntBASIC2□□□□□ -2.09
DDX58O95786 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2□□□□□ -2.09
DDX58O95786 RNU6-470P-201ENST00000515954 104 ntBASIC2□□□□□ -2.09
DDX58O95786 AC010615.1-201ENST00000594254 1764 ntBASIC2□□□□□ -2.09
DDX58O95786 Y_RNA.67-201ENST00000362870 100 ntBASIC1.99□□□□□ -2.09
DDX58O95786 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
DDX58O95786 Y_RNA.164-201ENST00000363709 102 ntBASIC1.99□□□□□ -2.09
DDX58O95786 Y_RNA.263-201ENST00000364659 114 ntBASIC1.99□□□□□ -2.09
DDX58O95786 MIR517C-201ENST00000385103 95 ntBASIC1.99□□□□□ -2.09
DDX58O95786 RNU4-62P-201ENST00000410125 130 ntBASIC1.99□□□□□ -2.09
DDX58O95786 RPL23AP36-201ENST00000413895 458 ntBASIC1.99□□□□□ -2.09
DDX58O95786 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.99□□□□□ -2.09
DDX58O95786 U8.22-201ENST00000459141 133 ntBASIC1.99□□□□□ -2.09
DDX58O95786 AC108729.3-201ENST00000513484 108 ntBASIC1.99□□□□□ -2.09
DDX58O95786 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.99□□□□□ -2.09
DDX58O95786 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
DDX58O95786 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
DDX58O95786 Y_RNA.4-201ENST00000362333 112 ntBASIC1.98□□□□□ -2.09
DDX58O95786 RNU6-1266P-201ENST00000362794 105 ntBASIC1.98□□□□□ -2.09
DDX58O95786 Y_RNA.238-201ENST00000364441 102 ntBASIC1.98□□□□□ -2.09
DDX58O95786 RNU6-60P-201ENST00000364792 103 ntBASIC1.98□□□□□ -2.09
DDX58O95786 Y_RNA.577-201ENST00000384794 101 ntBASIC1.98□□□□□ -2.09
DDX58O95786 SNORA67.6-201ENST00000391093 99 ntBASIC1.98□□□□□ -2.09
DDX58O95786 RNA5SP323-201ENST00000391094 133 ntBASIC1.98□□□□□ -2.09
DDX58O95786 RNY4P36-201ENST00000391116 96 ntBASIC1.98□□□□□ -2.09
DDX58O95786 BTF3P4-201ENST00000418852 495 ntBASIC1.98□□□□□ -2.09
DDX58O95786 CST2P1-201ENST00000425770 87 ntBASIC1.98□□□□□ -2.09
DDX58O95786 AC069257.2-201ENST00000441819 155 ntBASIC1.98□□□□□ -2.09
DDX58O95786 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
DDX58O95786 UQCRBP2-201ENST00000447827 297 ntBASIC1.98□□□□□ -2.09
DDX58O95786 Y_RNA.632-201ENST00000459189 102 ntBASIC1.98□□□□□ -2.09
DDX58O95786 AC103810.8-201ENST00000607347 118 ntBASIC1.98□□□□□ -2.09
DDX58O95786 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.98□□□□□ -2.09
DDX58O95786 MIR378A-201ENST00000362177 66 ntBASIC1.97□□□□□ -2.09
DDX58O95786 RNA5SP361-201ENST00000362686 118 ntBASIC1.97□□□□□ -2.09
DDX58O95786 snoU2-30.2-201ENST00000362805 70 ntBASIC1.97□□□□□ -2.09
DDX58O95786 SNORA72.2-201ENST00000365028 127 ntBASIC1.97□□□□□ -2.09
DDX58O95786 RNU6-417P-201ENST00000384712 107 ntBASIC1.97□□□□□ -2.09
DDX58O95786 MIR30A-201ENST00000385092 71 ntBASIC1.97□□□□□ -2.09
DDX58O95786 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
DDX58O95786 SNORA69.1-201ENST00000390904 137 ntBASIC1.97□□□□□ -2.09
DDX58O95786 Y_RNA.605-201ENST00000410577 105 ntBASIC1.97□□□□□ -2.09
DDX58O95786 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX58O95786 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX58O95786 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX58O95786 RNU7-169P-201ENST00000459456 61 ntBASIC1.97□□□□□ -2.09
DDX58O95786 RNU6-221P-201ENST00000459541 99 ntBASIC1.97□□□□□ -2.09
DDX58O95786 AC105758.1-201ENST00000506038 399 ntBASIC1.97□□□□□ -2.09
DDX58O95786 Y_RNA.718-201ENST00000517110 102 ntBASIC1.97□□□□□ -2.09
DDX58O95786 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
DDX58O95786 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX58O95786 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
DDX58O95786 AC125232.2-201ENST00000592457 143 ntBASIC1.97□□□□□ -2.09
DDX58O95786 snoU13.31-201ENST00000607291 104 ntBASIC1.97□□□□□ -2.09
DDX58O95786 AL353149.1-201ENST00000610667 244 ntBASIC1.97□□□□□ -2.09
DDX58O95786 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX58O95786 MIR8074-201ENST00000615081 81 ntBASIC1.97□□□□□ -2.09
DDX58O95786 MIR338-201ENST00000636369 67 ntBASIC1.97□□□□□ -2.09
DDX58O95786 AC112487.2-201ENST00000637950 304 ntBASIC1.97□□□□□ -2.09
DDX58O95786 RNU1-42P-201ENST00000364033 160 ntBASIC1.96□□□□□ -2.1
DDX58O95786 Y_RNA.314-201ENST00000365114 102 ntBASIC1.96□□□□□ -2.1
DDX58O95786 RNU6-1240P-201ENST00000365155 104 ntBASIC1.96□□□□□ -2.1
DDX58O95786 MIR515-2-201ENST00000384883 83 ntBASIC1.96□□□□□ -2.1
DDX58O95786 MIR515-1-201ENST00000384884 83 ntBASIC1.96□□□□□ -2.1
DDX58O95786 MIR329-1-201ENST00000385028 80 ntBASIC1.96□□□□□ -2.1
DDX58O95786 MIR1185-2-201ENST00000408687 86 ntBASIC1.96□□□□□ -2.1
DDX58O95786 RNA5SP247-201ENST00000411181 105 ntBASIC1.96□□□□□ -2.1
DDX58O95786 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX58O95786 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.96□□□□□ -2.1
DDX58O95786 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.96□□□□□ -2.1
DDX58O95786 AC025465.3-201ENST00000510570 311 ntBASIC1.96□□□□□ -2.1
DDX58O95786 RNU7-4P-201ENST00000516961 62 ntBASIC1.96□□□□□ -2.1
DDX58O95786 AC025647.1-201ENST00000517879 253 ntBASIC1.96□□□□□ -2.1
DDX58O95786 AC091144.1-201ENST00000519573 138 ntBASIC1.96□□□□□ -2.1
DDX58O95786 AC144568.1-201ENST00000520139 137 ntBASIC1.96□□□□□ -2.1
DDX58O95786 AK6P2-201ENST00000549020 471 ntBASIC1.96□□□□□ -2.1
DDX58O95786 SUB1P3-201ENST00000564581 315 ntBASIC1.96□□□□□ -2.1
DDX58O95786 AL645939.4-201ENST00000604495 135 ntBASIC1.96□□□□□ -2.1
DDX58O95786 AL512598.1-201ENST00000610158 273 ntBASIC1.96□□□□□ -2.1
DDX58O95786 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.95□□□□□ -2.1
DDX58O95786 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms