Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.17□□□□□ -2.22
CTDNEP1O95476 AC107399.1-201ENST00000451226 265 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 U8.22-201ENST00000459141 133 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 RNU7-57P-201ENST00000459540 60 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 AC099513.1-201ENST00000490423 301 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 AC011406.1-201ENST00000512440 370 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.17□□□□□ -2.22
CTDNEP1O95476 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 MZT1P2-201ENST00000604387 248 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.17□□□□□ -2.22
CTDNEP1O95476 MIR338-201ENST00000636369 67 ntBASIC1.17□□□□□ -2.22
CTDNEP1O95476 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CTDNEP1O95476 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CTDNEP1O95476 Y_RNA.2-201ENST00000362330 96 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-392P-201ENST00000364926 101 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 Y_RNA.303-201ENST00000364998 94 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-245P-201ENST00000384020 107 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 Y_RNA.474-201ENST00000384341 102 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-1235P-201ENST00000384559 107 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-57P-201ENST00000411348 103 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-1304P-201ENST00000411374 106 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.16□□□□□ -2.22
CTDNEP1O95476 AL353997.1-201ENST00000432936 108 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 AC092473.1-201ENST00000441098 221 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 AC245517.4-201ENST00000448601 281 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-498P-201ENST00000459468 107 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU7-175P-201ENST00000515915 61 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-1053P-201ENST00000515930 101 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 RNU6-948P-201ENST00000516374 107 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 SCARNA16.2-201ENST00000516520 172 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 SUMO2P18-201ENST00000518873 252 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 AC105029.1-201ENST00000520250 669 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 AC134698.4-201ENST00000523451 826 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.16□□□□□ -2.22
CTDNEP1O95476 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.16□□□□□ -2.22
CTDNEP1O95476 TPTEP1-208ENST00000636884 213 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 AC099654.14-201ENST00000638599 341 ntBASIC1.16□□□□□ -2.22
CTDNEP1O95476 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNY1P16-201ENST00000363063 111 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNU6-137P-201ENST00000363680 108 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNU6-593P-201ENST00000364716 112 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 Y_RNA.287-201ENST00000364853 94 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNU6-281P-201ENST00000384212 103 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 Y_RNA.490-201ENST00000384413 102 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNU6-541P-201ENST00000384709 110 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 SNORA75.4-201ENST00000391278 119 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 HMGN2P34-201ENST00000437647 269 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RPL31P58-201ENST00000469001 379 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AC116353.2-201ENST00000505332 712 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNU2-34P-201ENST00000516534 121 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 Y_RNA.708-201ENST00000516950 96 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNA5SP437-201ENST00000517249 129 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AC025647.1-201ENST00000517879 253 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.15□□□□□ -2.23
CTDNEP1O95476 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.15□□□□□ -2.23
CTDNEP1O95476 MIR5695-201ENST00000579717 85 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AC125232.2-201ENST00000592457 143 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AL359821.1-201ENST00000605519 182 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 SNORD11B-201ENST00000607707 90 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AL353149.1-201ENST00000610667 244 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AL355073.2-201ENST00000612106 557 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AC006001.4-201ENST00000622243 395 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 AC245060.5-201ENST00000610778 3293 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 MTND5P16-201ENST00000460269 1703 ntBASIC1.15□□□□□ -2.23
CTDNEP1O95476 RNU1-96P-201ENST00000364163 162 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CTDNEP1O95476 RNU1-139P-201ENST00000391307 165 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 MIR190B-201ENST00000401119 79 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.14□□□□□ -2.23
CTDNEP1O95476 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.14□□□□□ -2.23
CTDNEP1O95476 EIF1P2-201ENST00000428233 350 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 RNU6-221P-201ENST00000459541 99 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 COX6CP14-201ENST00000469580 174 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 RNA5SP445-201ENST00000515889 115 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 RNU6-1114P-201ENST00000516022 107 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 FRG2DP-202ENST00000566967 323 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 AL357075.2-201ENST00000614906 189 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 AL078596.1-201ENST00000624856 447 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 snoZ196.1-201ENST00000625269 89 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.14□□□□□ -2.23
CTDNEP1O95476 AL669831.3-213ENST00000636676 183 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 U6.108-201ENST00000637764 58 ntBASIC1.14□□□□□ -2.23
CTDNEP1O95476 snoU2-30.2-201ENST00000362805 70 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 RNU6-793P-201ENST00000384233 104 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 Y_RNA.557-201ENST00000384680 107 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 RNU6-417P-201ENST00000384712 107 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 RNA5SP467-201ENST00000391274 118 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 MIR320B2-201ENST00000408479 138 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 MIR1185-2-201ENST00000408687 86 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 RNU6-1001P-201ENST00000411265 100 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 USMG5P1-201ENST00000425964 177 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 AC005840.1-201ENST00000498412 377 ntBASIC1.13□□□□□ -2.23
CTDNEP1O95476 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms