Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC010525.2-201ENST00000590920 195 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.64□□□□□ -2.31
UPK1BO75841 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
UPK1BO75841 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UPK1BO75841 RNU6-280P-201ENST00000364145 104 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 Y_RNA.267-201ENST00000364679 109 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 SNORA2.2-201ENST00000365473 135 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 MIR532-201ENST00000385025 91 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 SNORA75.2-201ENST00000391138 150 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 SNORA75.3-201ENST00000391231 150 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 MTND1P26-201ENST00000440488 538 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
UPK1BO75841 RPL39P39-201ENST00000455840 151 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 AC091021.1-201ENST00000468051 388 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 AC022493.2-201ENST00000506122 481 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 RNU7-172P-201ENST00000517125 64 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.63□□□□□ -2.31
UPK1BO75841 CBX3P8-201ENST00000532412 525 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.63□□□□□ -2.31
UPK1BO75841 MTND3P12-201ENST00000559068 328 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.63□□□□□ -2.31
UPK1BO75841 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.63□□□□□ -2.31
UPK1BO75841 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.63□□□□□ -2.31
UPK1BO75841 MTND5P26-201ENST00000426018 1752 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
UPK1BO75841 AL391987.6-201ENST00000305671 199 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 MIR378A-201ENST00000362177 66 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 RNU6-17P-201ENST00000384245 107 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 RNU6-1119P-201ENST00000384349 108 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 RNU6-18P-201ENST00000384527 107 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.62□□□□□ -2.31
UPK1BO75841 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.62□□□□□ -2.31
UPK1BO75841 MTCO3P18-201ENST00000440206 761 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.62□□□□□ -2.31
UPK1BO75841 AP000870.1-201ENST00000472927 406 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.62□□□□□ -2.31
UPK1BO75841 AC010598.1-201ENST00000510378 103 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AC097462.1-201ENST00000514125 324 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 ACA59.1-201ENST00000515966 143 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 RNU2-56P-201ENST00000516826 190 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AC136628.3-201ENST00000521868 290 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.62□□□□□ -2.31
UPK1BO75841 MIR3611-201ENST00000584484 83 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.62□□□□□ -2.31
UPK1BO75841 AL117336.2-201ENST00000602435 335 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AL357312.1-201ENST00000603879 298 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 RN7SKP299-201ENST00000606679 301 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AL138726.1-201ENST00000614873 333 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 AC068137.3-201ENST00000639191 341 ntBASIC0.62□□□□□ -2.31
UPK1BO75841 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
UPK1BO75841 SNORA1B-201ENST00000362535 133 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 Y_RNA.77-201ENST00000362962 107 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
UPK1BO75841 MIR10B-201ENST00000385011 110 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 RNU6-780P-201ENST00000391030 104 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 MTCO3P40-201ENST00000392516 676 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 DAP3P1-201ENST00000441522 278 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.61□□□□□ -2.31
UPK1BO75841 RNU7-21P-201ENST00000459430 62 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 AC093303.1-201ENST00000514549 295 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 Y_RNA.693-201ENST00000516641 110 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.61□□□□□ -2.31
UPK1BO75841 AL512360.1-201ENST00000555346 234 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 PIGPP4-201ENST00000584447 307 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 AC019193.3-201ENST00000609144 554 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 AL096861.1-201ENST00000610899 123 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 AC010999.1-201ENST00000611856 324 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 AP000770.2-201ENST00000623694 100 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 MIR3974-201ENST00000637126 96 ntBASIC0.61□□□□□ -2.31
UPK1BO75841 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
UPK1BO75841 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 SNORA20B-201ENST00000384220 132 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 RPEP5-201ENST00000441137 268 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.6□□□□□ -2.31
UPK1BO75841 snoU13.25-201ENST00000458945 104 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 AC005840.1-201ENST00000498412 377 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.6□□□□□ -2.31
UPK1BO75841 AC018710.1-201ENST00000506509 158 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 Y_RNA.704-201ENST00000516851 102 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 RNU6-1116P-201ENST00000517269 99 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 MIR4781-201ENST00000585250 76 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 AC124864.2-201ENST00000624736 186 ntBASIC0.6□□□□□ -2.31
UPK1BO75841 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
UPK1BO75841 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
UPK1BO75841 RNU6-407P-201ENST00000365280 104 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 RNU6-259P-201ENST00000383999 107 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 SNORD116-13-201ENST00000384408 92 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 RNU6-306P-201ENST00000384617 107 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.59□□□□□ -2.31
UPK1BO75841 MTCO3P19-201ENST00000415864 321 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 MTATP6P13-201ENST00000438531 667 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 RNA5SP255-201ENST00000516370 107 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 RNU6-1291P-201ENST00000516591 104 ntBASIC0.59□□□□□ -2.31
UPK1BO75841 AC134698.4-201ENST00000523451 826 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms