Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR4280-201ENST00000582178 76 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU4-76P-201ENST00000364509 141 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU4-88P-201ENST00000411220 86 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 ART2BP-201ENST00000453501 499 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 MTCO3P8-201ENST00000453691 755 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-448P-201ENST00000517052 107 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.5□□□□□ -2.49
USH2AO75445 BNIP3P24-201ENST00000593398 557 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 AC078795.3-201ENST00000602913 472 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 MTND3P19-201ENST00000603825 345 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-86P-201ENST00000606534 107 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
USH2AO75445 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 SNORD56B-201ENST00000384713 71 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-466P-201ENST00000391224 103 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RPL39P34-201ENST00000477141 156 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-714P-201ENST00000516963 103 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.51□□□□□ -2.49
USH2AO75445 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC015688.2-201ENST00000584523 262 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 MT-TC-201ENST00000387405 66 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-721P-201ENST00000410155 105 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC127391.1-201ENST00000411737 98 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC073464.1-201ENST00000429823 534 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC093259.1-201ENST00000509755 300 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.51□□□□□ -2.49
USH2AO75445 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.51□□□□□ -2.49
USH2AO75445 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.51□□□□□ -2.49
USH2AO75445 AL162424.1-201ENST00000602325 221 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 SNORD115-15-201ENST00000364809 81 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 MIR501-201ENST00000390204 84 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.51□□□□□ -2.49
USH2AO75445 USP9YP22-201ENST00000438971 294 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.51□□□□□ -2.49
USH2AO75445 AC105036.1-201ENST00000566222 271 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-187P-201ENST00000384139 106 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-190P-201ENST00000384154 102 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-217P-201ENST00000384164 104 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 MIR660-201ENST00000385235 97 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 USP9YP13-201ENST00000417797 480 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 MTCO2P23-201ENST00000425216 680 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 CALM2P4-201ENST00000430810 426 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 snoU13.30-201ENST00000458951 104 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-415P-201ENST00000516252 97 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-252P-201ENST00000363232 107 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 SNORA72.2-201ENST00000365028 127 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 RNU6-701P-201ENST00000384059 107 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 BEND7P1-201ENST00000422058 457 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC007000.2-201ENST00000442564 487 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.51□□□□□ -2.49
USH2AO75445 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.51□□□□□ -2.49
USH2AO75445 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.51□□□□□ -2.49
USH2AO75445 MIR378D2-201ENST00000580636 98 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 AC055876.5-201ENST00000605667 259 ntBASIC-0.51□□□□□ -2.49
USH2AO75445 MIR876-201ENST00000401147 81 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 RNU2-15P-201ENST00000410692 191 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 FAM204CP-201ENST00000424489 642 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 RNU2-46P-201ENST00000517038 113 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 MIR3976-201ENST00000606807 139 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 AC239868.4-201ENST00000608318 671 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 RNU4-80P-201ENST00000363200 141 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 SNORD32B-201ENST00000364460 84 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 RNY4P13-201ENST00000384284 96 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 AC244505.6-201ENST00000452829 130 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.52□□□□□ -2.49
USH2AO75445 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 RNU6-504P-201ENST00000516568 104 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 MIR3152-201ENST00000579801 74 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 AC104996.3-201ENST00000590718 94 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 AL596327.1-201ENST00000603629 213 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
USH2AO75445 RNU6-164P-201ENST00000364604 103 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 TPTE2P5-203ENST00000458118 728 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.52□□□□□ -2.49
USH2AO75445 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.52□□□□□ -2.49
USH2AO75445 FTX_4.1-201ENST00000616291 147 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 RNU6-293P-201ENST00000411259 106 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 AC008267.5-201ENST00000424928 265 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.52□□□□□ -2.49
USH2AO75445 RNU6-28P-201ENST00000362378 107 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AL590135.1-201ENST00000422215 156 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC019205.3-201ENST00000424573 156 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AL512326.2-201ENST00000426359 151 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC093019.1-201ENST00000443135 252 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC023512.1-201ENST00000444513 499 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC016700.2-201ENST00000446011 156 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC112771.1-201ENST00000463581 102 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC015911.1-201ENST00000495111 156 ntBASIC-0.53□□□□□ -2.49
USH2AO75445 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms