Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC010409.1-201ENST00000487382 476 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GRIN3BO60391 AC104027.1-201ENST00000521887 300 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.54□□□□□ -1.84
GRIN3BO60391 AC009127.3-201ENST00000570531 403 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 AC103810.1-201ENST00000579873 453 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 MIR4765-201ENST00000585007 77 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GRIN3BO60391 AC073325.2-201ENST00000339545 159 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 Y_RNA.71-201ENST00000362892 104 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 Y_RNA.226-201ENST00000364337 114 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 SNORA40.19-201ENST00000390846 128 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 RNU1-101P-201ENST00000391171 127 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 AC009414.1-201ENST00000427200 443 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.53□□□□□ -1.84
GRIN3BO60391 AC096725.1-201ENST00000514266 313 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 RNU6-971P-201ENST00000516920 106 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 RNU6-844P-201ENST00000517175 102 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 SCARNA20.6-201ENST00000517251 106 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 HSPE1P18-201ENST00000517602 280 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.53□□□□□ -1.84
GRIN3BO60391 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.53□□□□□ -1.84
GRIN3BO60391 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.53□□□□□ -1.84
GRIN3BO60391 MIR3186-201ENST00000577404 85 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 AL670379.2-201ENST00000604983 252 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 AL078604.3-201ENST00000615580 211 ntBASIC3.53□□□□□ -1.84
GRIN3BO60391 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
GRIN3BO60391 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GRIN3BO60391 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
GRIN3BO60391 RNU6-653P-201ENST00000363074 106 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 SNORD115-30-201ENST00000364117 82 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 Y_RNA.243-201ENST00000364481 109 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 RNU6-449P-201ENST00000383914 107 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 MIR586-201ENST00000385035 97 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 AL138827.1-201ENST00000402666 306 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 RNU1-117P-201ENST00000517041 158 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.52□□□□□ -1.85
GRIN3BO60391 AC008739.2-201ENST00000597006 317 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 RPL30P11-203ENST00000598995 310 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 AL008718.3-201ENST00000610217 321 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 AL353997.5-201ENST00000618886 171 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 AC073476.4-201ENST00000628409 72 ntBASIC3.52□□□□□ -1.85
GRIN3BO60391 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
GRIN3BO60391 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
GRIN3BO60391 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GRIN3BO60391 RNU6-486P-201ENST00000363116 107 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 Y_RNA.361-201ENST00000365515 120 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 SNORD116-14-201ENST00000383894 92 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 SNORD116-17-201ENST00000383929 92 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 SNORD116-15-201ENST00000384445 92 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 SNORD116-19-201ENST00000384729 92 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 SNORA12-201ENST00000391162 147 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 AC016925.1-201ENST00000458303 298 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.51□□□□□ -1.85
GRIN3BO60391 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 RN7SKP282-201ENST00000516824 299 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 RNU6-1234P-201ENST00000516877 103 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 SCARNA11.3-201ENST00000517276 130 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.51□□□□□ -1.85
GRIN3BO60391 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.51□□□□□ -1.85
GRIN3BO60391 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.51□□□□□ -1.85
GRIN3BO60391 AC110079.1-202ENST00000635213 138 ntBASIC3.51□□□□□ -1.85
GRIN3BO60391 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.5□□□□□ -1.85
GRIN3BO60391 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
GRIN3BO60391 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GRIN3BO60391 RNU6-324P-201ENST00000363957 106 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 RNU6-429P-201ENST00000384582 108 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 RNY4P18-201ENST00000391107 89 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 RNU6-710P-201ENST00000410424 105 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 RNA5SP21-201ENST00000410917 96 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 BTF3P11-201ENST00000426582 477 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 MTND4LP9-201ENST00000427694 174 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 AC006539.3-201ENST00000454258 129 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 HMGN1P18-201ENST00000457642 277 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 CKS1BP2-201ENST00000497342 240 ntBASIC3.5□□□□□ -1.85
GRIN3BO60391 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
GRIN3BO60391 AL031003.1-201ENST00000404229 172 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 RNU4-53P-201ENST00000410828 140 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.49□□□□□ -1.85
GRIN3BO60391 AL137159.1-201ENST00000452808 512 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 SRIP1-201ENST00000489235 288 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 RNU1-143P-201ENST00000516296 146 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.49□□□□□ -1.85
GRIN3BO60391 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.49□□□□□ -1.85
GRIN3BO60391 MIR3684-201ENST00000579779 74 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 AL359881.1-201ENST00000602916 267 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 U1.23-201ENST00000610293 146 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 RNU1-68P-201ENST00000615382 146 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 U1.39-201ENST00000621562 146 ntBASIC3.49□□□□□ -1.85
GRIN3BO60391 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.49□□□□□ -1.85
GRIN3BO60391 AC010332.2-201ENST00000613083 1904 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GRIN3BO60391 RNU4-84P-201ENST00000364200 139 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 RNU1-112P-201ENST00000364401 164 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 Y_RNA.338-201ENST00000365320 114 ntBASIC3.48□□□□□ -1.85
GRIN3BO60391 MICF-203ENST00000432679 129 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms