Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU6-907P-201ENST00000390924 102 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 SRIP3-201ENST00000413200 219 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.76□□□□□ -1.97
KDM1AO60341 AL451074.5-201ENST00000415894 435 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 AL139132.1-201ENST00000431587 344 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 AC107083.1-201ENST00000439643 279 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 MTCO1P44-201ENST00000441935 243 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 PRELID3BP1-201ENST00000457142 540 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 SNORA70.12-201ENST00000516084 153 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 MIR4643-201ENST00000577473 78 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 LARP7P3-201ENST00000579888 337 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.76□□□□□ -1.97
KDM1AO60341 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.76□□□□□ -1.97
KDM1AO60341 AL137790.1-201ENST00000634283 177 ntBASIC2.76□□□□□ -1.97
KDM1AO60341 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
KDM1AO60341 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
KDM1AO60341 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 ZNF271P-202ENST00000465539 1970 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 NDUFB4P4-201ENST00000404822 243 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 RNU2-61P-201ENST00000411069 191 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 AC087499.2-201ENST00000432861 149 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.75□□□□□ -1.97
KDM1AO60341 RNU7-26P-201ENST00000458980 63 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 AC025647.1-201ENST00000517879 253 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 AC009779.6-201ENST00000603972 165 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 MIR7106-201ENST00000612419 65 ntBASIC2.75□□□□□ -1.97
KDM1AO60341 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KDM1AO60341 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
KDM1AO60341 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KDM1AO60341 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KDM1AO60341 SNORD114-7-201ENST00000362520 77 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 Y_RNA.217-201ENST00000364214 105 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 Y_RNA.269-201ENST00000364685 89 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 RNU6-662P-201ENST00000384253 104 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 MIR873-201ENST00000401120 77 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 AL355796.1-201ENST00000406706 323 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 RNU6-710P-201ENST00000410424 105 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 AC016909.1-201ENST00000415916 166 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 Y_RNA.641-201ENST00000459414 105 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 RNU6-856P-201ENST00000516959 98 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 ZNF861P-201ENST00000588126 639 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.74□□□□□ -1.97
KDM1AO60341 AL159152.1-201ENST00000635019 2587 ntBASIC2.74□□□□□ -1.97
KDM1AO60341 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KDM1AO60341 MIR340-201ENST00000362125 95 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.82-201ENST00000363000 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.92-201ENST00000363043 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.99-201ENST00000363138 105 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.117-201ENST00000363294 101 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.235-201ENST00000364412 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.306-201ENST00000365015 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.312-201ENST00000365089 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.322-201ENST00000365151 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
KDM1AO60341 SNORA20B-201ENST00000384220 132 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 RNU6-1289P-201ENST00000384431 106 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.590-201ENST00000410140 107 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.650-201ENST00000459002 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 SNORD65B-201ENST00000459126 73 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 AC010598.1-201ENST00000510378 103 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 SNORA4.4-201ENST00000515921 135 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.777-201ENST00000516982 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.771-201ENST00000598668 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 Y_RNA.789-201ENST00000622480 102 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
KDM1AO60341 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
KDM1AO60341 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
KDM1AO60341 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
KDM1AO60341 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KDM1AO60341 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KDM1AO60341 Y_RNA.124-201ENST00000363339 93 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 RNU6-271P-201ENST00000363858 105 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 MIR144-201ENST00000384886 86 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 RNU2-14P-201ENST00000411053 191 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 AL121890.1-201ENST00000435457 205 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 CR769767.1-201ENST00000436337 346 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 RPL23AP7-203ENST00000449021 469 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.72□□□□□ -1.97
KDM1AO60341 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.72□□□□□ -1.97
KDM1AO60341 RNA5SP82-201ENST00000516707 92 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 AC009127.3-201ENST00000570531 403 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 MIR4282-201ENST00000583613 67 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 AC006435.5-201ENST00000624486 112 ntBASIC2.72□□□□□ -1.97
KDM1AO60341 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
KDM1AO60341 SNORA27.1-201ENST00000362604 124 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 RNU6-1272P-201ENST00000362776 107 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 Y_RNA.76-201ENST00000362931 109 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 Y_RNA.122-201ENST00000363331 96 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 RNU6-1240P-201ENST00000365155 104 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 EDDM3CP-201ENST00000415977 425 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 AC105272.1-201ENST00000438604 198 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 AC025750.2-201ENST00000442609 450 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 SNORD2.1-201ENST00000458762 69 ntBASIC2.71□□□□□ -1.98
KDM1AO60341 Y_RNA.679-201ENST00000516416 91 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms