Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
SSX4O60224 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.83□□□□□ -2.12
SSX4O60224 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.83□□□□□ -2.12
SSX4O60224 AC006600.1-201ENST00000572529 153 ntBASIC1.83□□□□□ -2.12
SSX4O60224 AL353149.1-201ENST00000610667 244 ntBASIC1.83□□□□□ -2.12
SSX4O60224 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
SSX4O60224 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
SSX4O60224 uc_338.22-201ENST00000622722 187 ntBASIC1.83□□□□□ -2.12
SSX4O60224 AL160413.1-201ENST00000622780 310 ntBASIC1.83□□□□□ -2.12
SSX4O60224 AC090574.1-201ENST00000623186 233 ntBASIC1.83□□□□□ -2.12
SSX4O60224 MIR4272-201ENST00000635924 64 ntBASIC1.83□□□□□ -2.12
SSX4O60224 MIR338-201ENST00000636369 67 ntBASIC1.83□□□□□ -2.12
SSX4O60224 MTND4P29-201ENST00000503122 1372 ntBASIC1.83□□□□□ -2.12
SSX4O60224 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AL356292.1-201ENST00000283110 373 ntBASIC1.82□□□□□ -2.12
SSX4O60224 snoU2-30.2-201ENST00000362805 70 ntBASIC1.82□□□□□ -2.12
SSX4O60224 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
SSX4O60224 Y_RNA.813-201ENST00000364639 102 ntBASIC1.82□□□□□ -2.12
SSX4O60224 RNU6-1240P-201ENST00000365155 104 ntBASIC1.82□□□□□ -2.12
SSX4O60224 SNORD42.2-201ENST00000365570 69 ntBASIC1.82□□□□□ -2.12
SSX4O60224 RNU6-1264P-201ENST00000383891 107 ntBASIC1.82□□□□□ -2.12
SSX4O60224 RNU6-926P-201ENST00000384075 107 ntBASIC1.82□□□□□ -2.12
SSX4O60224 RNU6-708P-201ENST00000384217 107 ntBASIC1.82□□□□□ -2.12
SSX4O60224 Y_RNA.460-201ENST00000384255 102 ntBASIC1.82□□□□□ -2.12
SSX4O60224 RNY3P4-201ENST00000384428 101 ntBASIC1.82□□□□□ -2.12
SSX4O60224 Y_RNA.498-201ENST00000384460 102 ntBASIC1.82□□□□□ -2.12
SSX4O60224 MIR1253-201ENST00000408273 105 ntBASIC1.82□□□□□ -2.12
SSX4O60224 TOMM22P2-201ENST00000430735 237 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.82□□□□□ -2.12
SSX4O60224 HMGN2P34-201ENST00000437647 269 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AL137792.2-201ENST00000443484 235 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.82□□□□□ -2.12
SSX4O60224 RNU6-625P-201ENST00000459412 107 ntBASIC1.82□□□□□ -2.12
SSX4O60224 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
SSX4O60224 HMGN1P13-201ENST00000505795 138 ntBASIC1.82□□□□□ -2.12
SSX4O60224 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.82□□□□□ -2.12
SSX4O60224 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.82□□□□□ -2.12
SSX4O60224 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.82□□□□□ -2.12
SSX4O60224 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
SSX4O60224 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
SSX4O60224 VN1R91P-201ENST00000594377 169 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
SSX4O60224 AC090971.5-201ENST00000621102 293 ntBASIC1.82□□□□□ -2.12
SSX4O60224 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SSX4O60224 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SSX4O60224 Y_RNA.112-201ENST00000363250 102 ntBASIC1.81□□□□□ -2.12
SSX4O60224 RNU1-115P-201ENST00000365329 160 ntBASIC1.81□□□□□ -2.12
SSX4O60224 Y_RNA.395-201ENST00000383945 109 ntBASIC1.81□□□□□ -2.12
SSX4O60224 RNU6-417P-201ENST00000384712 107 ntBASIC1.81□□□□□ -2.12
SSX4O60224 SNORA48.3-201ENST00000391081 134 ntBASIC1.81□□□□□ -2.12
SSX4O60224 RNA5SP212-201ENST00000391223 107 ntBASIC1.81□□□□□ -2.12
SSX4O60224 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
SSX4O60224 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
SSX4O60224 RNU6-1146P-201ENST00000516282 102 ntBASIC1.81□□□□□ -2.12
SSX4O60224 SCARNA16.3-201ENST00000516595 184 ntBASIC1.81□□□□□ -2.12
SSX4O60224 RNU4-77P-201ENST00000516692 156 ntBASIC1.81□□□□□ -2.12
SSX4O60224 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.81□□□□□ -2.12
SSX4O60224 Y_RNA.39-201ENST00000362620 98 ntBASIC1.8□□□□□ -2.12
SSX4O60224 Y_RNA.287-201ENST00000364853 94 ntBASIC1.8□□□□□ -2.12
SSX4O60224 Y_RNA.394-201ENST00000383942 103 ntBASIC1.8□□□□□ -2.12
SSX4O60224 RNY1P14-201ENST00000384426 108 ntBASIC1.8□□□□□ -2.12
SSX4O60224 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.8□□□□□ -2.12
SSX4O60224 RNA5SP100-201ENST00000410903 110 ntBASIC1.8□□□□□ -2.12
SSX4O60224 RNA5SP59-201ENST00000410922 110 ntBASIC1.8□□□□□ -2.12
SSX4O60224 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
SSX4O60224 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.8□□□□□ -2.12
SSX4O60224 RAB28P5-201ENST00000427490 651 ntBASIC1.8□□□□□ -2.12
SSX4O60224 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.8□□□□□ -2.12
SSX4O60224 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.8□□□□□ -2.12
SSX4O60224 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX4O60224 RPL23AP6-201ENST00000446637 472 ntBASIC1.8□□□□□ -2.12
SSX4O60224 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
SSX4O60224 Y_RNA.639-201ENST00000458981 102 ntBASIC1.8□□□□□ -2.12
SSX4O60224 RNU6-408P-201ENST00000515910 100 ntBASIC1.8□□□□□ -2.12
SSX4O60224 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.8□□□□□ -2.12
SSX4O60224 AP002001.1-203ENST00000534002 267 ntBASIC1.8□□□□□ -2.12
SSX4O60224 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
SSX4O60224 AC005034.5-201ENST00000604219 466 ntBASIC1.8□□□□□ -2.12
SSX4O60224 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.8□□□□□ -2.12
SSX4O60224 SNORD58B-201ENST00000607313 66 ntBASIC1.8□□□□□ -2.12
SSX4O60224 AC006157.1-201ENST00000611750 366 ntBASIC1.8□□□□□ -2.12
SSX4O60224 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.8□□□□□ -2.12
SSX4O60224 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.8□□□□□ -2.12
SSX4O60224 AL606534.2-204ENST00000635008 178 ntBASIC1.8□□□□□ -2.12
SSX4O60224 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
SSX4O60224 Y_RNA.27-201ENST00000362540 103 ntBASIC1.79□□□□□ -2.12
SSX4O60224 RNU6-1266P-201ENST00000362794 105 ntBASIC1.79□□□□□ -2.12
SSX4O60224 Y_RNA.80-201ENST00000362996 102 ntBASIC1.79□□□□□ -2.12
SSX4O60224 SNORA33-201ENST00000363664 130 ntBASIC1.79□□□□□ -2.12
SSX4O60224 Y_RNA.485-201ENST00000384395 102 ntBASIC1.79□□□□□ -2.12
SSX4O60224 RNU6-308P-201ENST00000390957 107 ntBASIC1.79□□□□□ -2.12
SSX4O60224 SNORD78.2-201ENST00000391076 69 ntBASIC1.79□□□□□ -2.12
SSX4O60224 MTCO3P19-201ENST00000415864 321 ntBASIC1.79□□□□□ -2.12
SSX4O60224 CST2P1-201ENST00000425770 87 ntBASIC1.79□□□□□ -2.12
SSX4O60224 FCF1P4-201ENST00000448326 183 ntBASIC1.79□□□□□ -2.12
SSX4O60224 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
SSX4O60224 RNU6-1012P-201ENST00000516606 109 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms