Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 AC010531.2-201ENST00000465012 153 ntBASIC2.45□□□□□ -2.02
RRP9O43818 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.45□□□□□ -2.02
RRP9O43818 HMGB3P17-201ENST00000504195 649 ntBASIC2.45□□□□□ -2.02
RRP9O43818 Y_RNA.668-201ENST00000516233 93 ntBASIC2.45□□□□□ -2.02
RRP9O43818 RNU6-155P-201ENST00000516347 100 ntBASIC2.45□□□□□ -2.02
RRP9O43818 RN7SKP57-201ENST00000517248 293 ntBASIC2.45□□□□□ -2.02
RRP9O43818 MIR8057-201ENST00000620957 69 ntBASIC2.45□□□□□ -2.02
RRP9O43818 AC006001.4-201ENST00000622243 395 ntBASIC2.45□□□□□ -2.02
RRP9O43818 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.45□□□□□ -2.02
RRP9O43818 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RRP9O43818 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.44□□□□□ -2.02
RRP9O43818 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RRP9O43818 RNU6-290P-201ENST00000365212 101 ntBASIC2.44□□□□□ -2.02
RRP9O43818 RNU6-418P-201ENST00000384035 107 ntBASIC2.44□□□□□ -2.02
RRP9O43818 Y_RNA.541-201ENST00000384640 113 ntBASIC2.44□□□□□ -2.02
RRP9O43818 RNU6-57P-201ENST00000411348 103 ntBASIC2.44□□□□□ -2.02
RRP9O43818 EDDM3CP-201ENST00000415977 425 ntBASIC2.44□□□□□ -2.02
RRP9O43818 AC009963.1-201ENST00000417265 157 ntBASIC2.44□□□□□ -2.02
RRP9O43818 AL357134.1-201ENST00000445848 426 ntBASIC2.44□□□□□ -2.02
RRP9O43818 HSPE1P25-201ENST00000455484 251 ntBASIC2.44□□□□□ -2.02
RRP9O43818 RNU6-221P-201ENST00000459541 99 ntBASIC2.44□□□□□ -2.02
RRP9O43818 RNU2-12P-201ENST00000517216 168 ntBASIC2.44□□□□□ -2.02
RRP9O43818 MIR3684-201ENST00000579779 74 ntBASIC2.44□□□□□ -2.02
RRP9O43818 AL627230.6-201ENST00000611129 280 ntBASIC2.44□□□□□ -2.02
RRP9O43818 AL590240.4-201ENST00000616908 390 ntBASIC2.44□□□□□ -2.02
RRP9O43818 IGHVIII-44-202ENST00000636235 289 ntBASIC2.44□□□□□ -2.02
RRP9O43818 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.44□□□□□ -2.02
RRP9O43818 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RRP9O43818 Y_RNA.99-201ENST00000363138 105 ntBASIC2.43□□□□□ -2.02
RRP9O43818 RNU1-91P-201ENST00000364746 163 ntBASIC2.43□□□□□ -2.02
RRP9O43818 Y_RNA.286-201ENST00000364813 102 ntBASIC2.43□□□□□ -2.02
RRP9O43818 Y_RNA.401-201ENST00000383965 117 ntBASIC2.43□□□□□ -2.02
RRP9O43818 MTCO1P44-201ENST00000441935 243 ntBASIC2.43□□□□□ -2.02
RRP9O43818 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.43□□□□□ -2.02
RRP9O43818 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
RRP9O43818 AC026271.5-201ENST00000577873 130 ntBASIC2.43□□□□□ -2.02
RRP9O43818 MIR4325-201ENST00000583049 90 ntBASIC2.43□□□□□ -2.02
RRP9O43818 AC013412.1-201ENST00000610687 192 ntBASIC2.43□□□□□ -2.02
RRP9O43818 AC127459.3-201ENST00000624328 466 ntBASIC2.43□□□□□ -2.02
RRP9O43818 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.43□□□□□ -2.02
RRP9O43818 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
RRP9O43818 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RRP9O43818 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
RRP9O43818 RNA5SP374-201ENST00000362939 125 ntBASIC2.42□□□□□ -2.02
RRP9O43818 RNA5SP160-201ENST00000364866 120 ntBASIC2.42□□□□□ -2.02
RRP9O43818 SNORD14D-201ENST00000384390 87 ntBASIC2.42□□□□□ -2.02
RRP9O43818 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
RRP9O43818 Y_RNA.518-201ENST00000384552 113 ntBASIC2.42□□□□□ -2.02
RRP9O43818 RNU6-1199P-201ENST00000411249 104 ntBASIC2.42□□□□□ -2.02
RRP9O43818 AC139712.2-201ENST00000424302 339 ntBASIC2.42□□□□□ -2.02
RRP9O43818 POLR2KP2-201ENST00000438155 177 ntBASIC2.42□□□□□ -2.02
RRP9O43818 AC245102.2-201ENST00000448956 180 ntBASIC2.42□□□□□ -2.02
RRP9O43818 RPL23AP3-201ENST00000453844 468 ntBASIC2.42□□□□□ -2.02
RRP9O43818 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.42□□□□□ -2.02
RRP9O43818 RNU6-966P-201ENST00000516479 104 ntBASIC2.42□□□□□ -2.02
RRP9O43818 MIR3122-201ENST00000577243 73 ntBASIC2.42□□□□□ -2.02
RRP9O43818 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.42□□□□□ -2.02
RRP9O43818 MIR5002-201ENST00000584713 97 ntBASIC2.42□□□□□ -2.02
RRP9O43818 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.42□□□□□ -2.02
RRP9O43818 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.42□□□□□ -2.02
RRP9O43818 AP001282.2-201ENST00000616149 309 ntBASIC2.42□□□□□ -2.02
RRP9O43818 AC010615.1-201ENST00000594254 1764 ntBASIC2.41□□□□□ -2.02
RRP9O43818 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
RRP9O43818 RNU6-1266P-201ENST00000362794 105 ntBASIC2.41□□□□□ -2.02
RRP9O43818 RNU6-525P-201ENST00000363685 104 ntBASIC2.41□□□□□ -2.02
RRP9O43818 RNU6-505P-201ENST00000384427 107 ntBASIC2.41□□□□□ -2.02
RRP9O43818 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RRP9O43818 MIR676-201ENST00000390702 67 ntBASIC2.41□□□□□ -2.02
RRP9O43818 SNORA53-201ENST00000391141 249 ntBASIC2.41□□□□□ -2.02
RRP9O43818 MIR1262-201ENST00000408276 93 ntBASIC2.41□□□□□ -2.02
RRP9O43818 RN7SKP284-201ENST00000411002 343 ntBASIC2.41□□□□□ -2.02
RRP9O43818 AC008134.1-201ENST00000420943 193 ntBASIC2.41□□□□□ -2.02
RRP9O43818 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.41□□□□□ -2.02
RRP9O43818 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.41□□□□□ -2.02
RRP9O43818 SUMO1P2-201ENST00000452524 304 ntBASIC2.41□□□□□ -2.02
RRP9O43818 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.41□□□□□ -2.02
RRP9O43818 MRPS17P9-201ENST00000511924 393 ntBASIC2.41□□□□□ -2.02
RRP9O43818 RNA5SP341-201ENST00000516261 117 ntBASIC2.41□□□□□ -2.02
RRP9O43818 RNU7-193P-201ENST00000516723 65 ntBASIC2.41□□□□□ -2.02
RRP9O43818 AC087441.2-201ENST00000529141 262 ntBASIC2.41□□□□□ -2.02
RRP9O43818 MIR3126-201ENST00000577443 74 ntBASIC2.41□□□□□ -2.02
RRP9O43818 AC037487.3-201ENST00000606668 112 ntBASIC2.41□□□□□ -2.02
RRP9O43818 AC062037.2-201ENST00000610137 73 ntBASIC2.41□□□□□ -2.02
RRP9O43818 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RRP9O43818 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
RRP9O43818 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.4□□□□□ -2.02
RRP9O43818 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
RRP9O43818 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
RRP9O43818 MIR340-201ENST00000362125 95 ntBASIC2.4□□□□□ -2.03
RRP9O43818 SNORD115-30-201ENST00000364117 82 ntBASIC2.4□□□□□ -2.03
RRP9O43818 Y_RNA.243-201ENST00000364481 109 ntBASIC2.4□□□□□ -2.03
RRP9O43818 Y_RNA.383-201ENST00000383855 97 ntBASIC2.4□□□□□ -2.03
RRP9O43818 RNU6-1338P-201ENST00000516328 91 ntBASIC2.4□□□□□ -2.03
RRP9O43818 RNU6-856P-201ENST00000516959 98 ntBASIC2.4□□□□□ -2.03
RRP9O43818 AC078899.2-201ENST00000595282 212 ntBASIC2.4□□□□□ -2.03
RRP9O43818 U6.115-201ENST00000636045 103 ntBASIC2.4□□□□□ -2.03
RRP9O43818 AL391987.6-201ENST00000305671 199 ntBASIC2.39□□□□□ -2.03
RRP9O43818 MIR335-201ENST00000362173 94 ntBASIC2.39□□□□□ -2.03
RRP9O43818 Y_RNA.16-201ENST00000362421 102 ntBASIC2.39□□□□□ -2.03
RRP9O43818 RNU6-324P-201ENST00000363957 106 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms