Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
SSNA1O43805 RNU6-654P-201ENST00000364373 107 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 SNORD113.3-201ENST00000364630 78 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 VTRNA1-3-201ENST00000365645 89 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 MIR520C-201ENST00000385005 87 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 AL121890.1-201ENST00000435457 205 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 MTCO3P10-201ENST00000455912 772 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.04□□□□□ -2.4
SSNA1O43805 CYCTP-201ENST00000504253 315 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.04□□□□□ -2.4
SSNA1O43805 RPL23AP94-201ENST00000512518 302 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 MTND4P7-201ENST00000523876 130 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.04□□□□□ -2.4
SSNA1O43805 AC120024.3-201ENST00000603167 156 ntBASIC0.04□□□□□ -2.4
SSNA1O43805 MIR1-1-201ENST00000362147 71 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 RNA5SP99-201ENST00000364020 114 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 Y_RNA.560-201ENST00000384689 102 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 MIR32-201ENST00000384965 70 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 RNU6-1304P-201ENST00000411374 106 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 MTND4P32-201ENST00000437189 1237 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 SNRPGP12-201ENST00000449481 213 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.03□□□□□ -2.4
SSNA1O43805 AL157687.1-201ENST00000554853 619 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.03□□□□□ -2.4
SSNA1O43805 CPDP1-201ENST00000579660 283 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 AL359821.1-201ENST00000605519 182 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 AP000720.1-201ENST00000625091 483 ntBASIC0.03□□□□□ -2.4
SSNA1O43805 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
SSNA1O43805 RNA5SP62-201ENST00000363457 110 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 Y_RNA.184-201ENST00000363884 108 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 RNA5SP48-201ENST00000363969 126 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 Y_RNA.319-201ENST00000365138 92 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 RNU6-376P-201ENST00000384731 106 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 MIR452-201ENST00000385020 85 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.02□□□□□ -2.41
SSNA1O43805 Z82188.1-201ENST00000436709 154 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 HSFY5P-201ENST00000453726 309 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
SSNA1O43805 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.02□□□□□ -2.41
SSNA1O43805 RNU6-189P-201ENST00000516120 101 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 SNORA74.3-201ENST00000517108 154 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 AC091144.1-201ENST00000519573 138 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.02□□□□□ -2.41
SSNA1O43805 AL162730.1-201ENST00000605734 292 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 snoU13.31-201ENST00000607291 104 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 AC073544.1-201ENST00000600110 1595 ntBASIC0.02□□□□□ -2.41
SSNA1O43805 MIR18A-201ENST00000362310 71 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 RNU1-93P-201ENST00000364704 169 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.01□□□□□ -2.41
SSNA1O43805 SNORA2B-201ENST00000384583 137 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 RNA5SP95-201ENST00000410319 137 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.01□□□□□ -2.41
SSNA1O43805 AC091885.1-201ENST00000506658 268 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AC105313.1-201ENST00000509121 353 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 TRMT112P2-201ENST00000512910 132 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AC074133.1-201ENST00000515696 183 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.01□□□□□ -2.41
SSNA1O43805 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.01□□□□□ -2.41
SSNA1O43805 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AL357078.3-201ENST00000607528 618 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AC010999.1-201ENST00000611856 324 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AL158209.2-201ENST00000619266 216 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AC015726.2-201ENST00000620112 122 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AC092634.7-201ENST00000621022 103 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 AC027279.3-201ENST00000625055 122 ntBASIC0.01□□□□□ -2.41
SSNA1O43805 SNORD14.1-201ENST00000365609 90 ntBASIC0□□□□□ -2.41
SSNA1O43805 SNORA20B-201ENST00000384220 132 ntBASIC0□□□□□ -2.41
SSNA1O43805 MIR516B2-201ENST00000385190 85 ntBASIC0□□□□□ -2.41
SSNA1O43805 AL590002.1-201ENST00000406554 418 ntBASIC0□□□□□ -2.41
SSNA1O43805 MIR1298-201ENST00000408783 112 ntBASIC0□□□□□ -2.41
SSNA1O43805 AC018865.2-201ENST00000423631 129 ntBASIC0□□□□□ -2.41
SSNA1O43805 AC073415.1-201ENST00000449240 153 ntBASIC0□□□□□ -2.41
SSNA1O43805 RNU7-63P-201ENST00000459054 62 ntBASIC0□□□□□ -2.41
SSNA1O43805 SNORD42A-201ENST00000459584 64 ntBASIC0□□□□□ -2.41
SSNA1O43805 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0□□□□□ -2.41
SSNA1O43805 AC018710.1-201ENST00000506509 158 ntBASIC0□□□□□ -2.41
SSNA1O43805 AC114811.1-201ENST00000507207 168 ntBASIC0□□□□□ -2.41
SSNA1O43805 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0□□□□□ -2.41
SSNA1O43805 AC092436.3-201ENST00000511788 257 ntBASIC0□□□□□ -2.41
SSNA1O43805 RNU6-496P-201ENST00000516145 99 ntBASIC0□□□□□ -2.41
SSNA1O43805 RNU11-2P-201ENST00000516898 142 ntBASIC0□□□□□ -2.41
SSNA1O43805 MIR4764-201ENST00000580680 88 ntBASIC0□□□□□ -2.41
SSNA1O43805 MIR4424-201ENST00000585257 86 ntBASIC0□□□□□ -2.41
SSNA1O43805 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0□□□□□ -2.41
SSNA1O43805 SNORD50.1-201ENST00000362987 71 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 RNU6-996P-201ENST00000365438 107 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 AL606923.1-201ENST00000406616 190 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 RNU6-248P-201ENST00000410720 107 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 MTATP6P18-201ENST00000417994 673 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 CYCSP46-201ENST00000423569 204 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 PCNPP5-201ENST00000452246 481 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 TPTE2P5-203ENST00000458118 728 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 MTCO1P29-201ENST00000496868 288 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 RNA5SP102-201ENST00000516865 106 ntBASIC-0.01□□□□□ -2.41
SSNA1O43805 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms