Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC007677.1-201ENST00000445757 515 ntBASIC1.79□□□□□ -2.12
AP3D1O14617 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.79□□□□□ -2.12
AP3D1O14617 RPS27P1-201ENST00000450552 247 ntBASIC1.79□□□□□ -2.12
AP3D1O14617 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.79□□□□□ -2.12
AP3D1O14617 RNU7-4P-201ENST00000516961 62 ntBASIC1.79□□□□□ -2.12
AP3D1O14617 Y_RNA.718-201ENST00000517110 102 ntBASIC1.79□□□□□ -2.12
AP3D1O14617 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.79□□□□□ -2.12
AP3D1O14617 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.79□□□□□ -2.12
AP3D1O14617 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.79□□□□□ -2.12
AP3D1O14617 MIR3684-201ENST00000579779 74 ntBASIC1.79□□□□□ -2.12
AP3D1O14617 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.79□□□□□ -2.12
AP3D1O14617 AC073544.1-201ENST00000600110 1595 ntBASIC1.79□□□□□ -2.12
AP3D1O14617 Y_RNA.70-201ENST00000362886 110 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 Y_RNA.259-201ENST00000364619 101 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 SNORA4.2-201ENST00000365313 147 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
AP3D1O14617 MTND5P20-201ENST00000448677 143 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.78□□□□□ -2.12
AP3D1O14617 TRBV12-1-201ENST00000479785 344 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 AC010598.1-201ENST00000510378 103 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 SNORA40.9-201ENST00000515895 93 ntBASIC1.78□□□□□ -2.12
AP3D1O14617 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.78□□□□□ -2.13
AP3D1O14617 AC092881.1-201ENST00000638218 2733 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 Y_RNA.263-201ENST00000364659 114 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 RNA5SP126-201ENST00000365092 109 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 RNY3P14-201ENST00000384309 102 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 MIR559-201ENST00000385188 96 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 RNU6-1009P-201ENST00000390996 107 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 RNA5SP109-201ENST00000391010 116 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 AL606517.2-201ENST00000442855 241 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 snoU13.9-201ENST00000458927 103 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 AC105758.1-201ENST00000506038 399 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 RNU7-99P-201ENST00000516271 62 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 AL355375.2-201ENST00000574825 175 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.77□□□□□ -2.13
AP3D1O14617 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
AP3D1O14617 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
AP3D1O14617 ZNF355P-201ENST00000427301 3216 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
AP3D1O14617 RNU6-490P-201ENST00000362985 107 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 U8.2-201ENST00000363156 134 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 Y_RNA.498-201ENST00000384460 102 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 MIR194-1-201ENST00000384892 85 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 RPL21P1-201ENST00000399532 476 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 RNU6-1186P-201ENST00000410429 97 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 SNORD12B-201ENST00000410433 91 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 MRPS18CP6-201ENST00000423587 223 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 RAB28P5-201ENST00000427490 651 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
AP3D1O14617 AC005002.2-201ENST00000438228 269 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 AC093019.1-201ENST00000443135 252 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 MRPS10P1-201ENST00000448483 130 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.76□□□□□ -2.13
AP3D1O14617 RNU7-152P-201ENST00000458982 64 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 RNU6-625P-201ENST00000459412 107 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 AL117351.2-201ENST00000513571 157 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 Y_RNA.702-201ENST00000516843 96 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 AC144568.1-201ENST00000520139 137 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.76□□□□□ -2.13
AP3D1O14617 AP002001.1-203ENST00000534002 267 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 MIR4438-201ENST00000585271 93 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 AC022217.4-201ENST00000604389 163 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 AC095038.3-201ENST00000634439 195 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
AP3D1O14617 AC100821.1-201ENST00000523153 2479 ntBASIC1.76□□□□□ -2.13
AP3D1O14617 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
AP3D1O14617 RNU4-42P-201ENST00000364738 142 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 AL079342.1-201ENST00000401460 267 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 AL355796.1-201ENST00000406706 323 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 COX6CP10-201ENST00000416832 224 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.75□□□□□ -2.13
AP3D1O14617 Y_RNA.632-201ENST00000459189 102 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 RPS29P21-201ENST00000496272 170 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.75□□□□□ -2.13
AP3D1O14617 RNU6-507P-201ENST00000516045 100 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 MIR4709-201ENST00000577272 72 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3D1O14617 MIR4648-201ENST00000580107 72 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 MIR3674-201ENST00000636576 68 ntBASIC1.75□□□□□ -2.13
AP3D1O14617 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
AP3D1O14617 MIR302D-201ENST00000362275 68 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 RNU6-1040P-201ENST00000383974 107 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 RNU6-203P-201ENST00000384038 104 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 SNORA20B-201ENST00000384220 132 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 Y_RNA.529-201ENST00000384586 119 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 AC019129.1-201ENST00000403786 261 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 AC099799.1-201ENST00000439809 192 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 RPS27P22-201ENST00000478056 241 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 AC010469.2-201ENST00000496412 480 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.74□□□□□ -2.13
AP3D1O14617 AC023157.2-201ENST00000540596 141 ntBASIC1.74□□□□□ -2.13
AP3D1O14617 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
AP3D1O14617 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
AP3D1O14617 RNU6-454P-201ENST00000364292 107 ntBASIC1.73□□□□□ -2.13
AP3D1O14617 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
AP3D1O14617 SNORA70B-201ENST00000384210 135 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms