Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HMGN2P8-201ENST00000391458 268 ntBASIC3.51□□□□□ -1.85
SOX1O00570 RN7SKP101-201ENST00000411376 320 ntBASIC3.51□□□□□ -1.85
SOX1O00570 AL135786.1-201ENST00000415892 214 ntBASIC3.51□□□□□ -1.85
SOX1O00570 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX1O00570 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.51□□□□□ -1.85
SOX1O00570 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.51□□□□□ -1.85
SOX1O00570 AC008413.1-201ENST00000511864 177 ntBASIC3.51□□□□□ -1.85
SOX1O00570 RNU6-991P-201ENST00000516168 107 ntBASIC3.51□□□□□ -1.85
SOX1O00570 RNA5SP76-201ENST00000516277 87 ntBASIC3.51□□□□□ -1.85
SOX1O00570 RNU6-579P-201ENST00000516879 102 ntBASIC3.51□□□□□ -1.85
SOX1O00570 Y_RNA.712-201ENST00000517011 92 ntBASIC3.51□□□□□ -1.85
SOX1O00570 AC120024.3-201ENST00000603167 156 ntBASIC3.51□□□□□ -1.85
SOX1O00570 AC090517.3-201ENST00000625170 141 ntBASIC3.51□□□□□ -1.85
SOX1O00570 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SOX1O00570 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SOX1O00570 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.51□□□□□ -1.85
SOX1O00570 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.5□□□□□ -1.85
SOX1O00570 AC007256.1-201ENST00000392253 2765 ntBASIC3.5□□□□□ -1.85
SOX1O00570 AL356292.1-201ENST00000283110 373 ntBASIC3.5□□□□□ -1.85
SOX1O00570 RNU4-41P-201ENST00000364426 143 ntBASIC3.5□□□□□ -1.85
SOX1O00570 RNU6-476P-201ENST00000384726 107 ntBASIC3.5□□□□□ -1.85
SOX1O00570 snoU13.15-201ENST00000459407 104 ntBASIC3.5□□□□□ -1.85
SOX1O00570 RNA5SP20-201ENST00000515976 84 ntBASIC3.5□□□□□ -1.85
SOX1O00570 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.5□□□□□ -1.85
SOX1O00570 RNU6-197P-201ENST00000516680 100 ntBASIC3.5□□□□□ -1.85
SOX1O00570 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.5□□□□□ -1.85
SOX1O00570 AC103810.1-201ENST00000579873 453 ntBASIC3.5□□□□□ -1.85
SOX1O00570 MIR4765-201ENST00000585007 77 ntBASIC3.5□□□□□ -1.85
SOX1O00570 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SOX1O00570 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.5□□□□□ -1.85
SOX1O00570 AL391516.1-201ENST00000554380 2449 ntBASIC3.5□□□□□ -1.85
SOX1O00570 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
SOX1O00570 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SOX1O00570 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SOX1O00570 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SOX1O00570 RNU6-429P-201ENST00000384582 108 ntBASIC3.49□□□□□ -1.85
SOX1O00570 MIR767-201ENST00000390228 109 ntBASIC3.49□□□□□ -1.85
SOX1O00570 AL031183.1-201ENST00000457667 207 ntBASIC3.49□□□□□ -1.85
SOX1O00570 RN7SL594P-201ENST00000470590 287 ntBASIC3.49□□□□□ -1.85
SOX1O00570 RNA5SP112-201ENST00000515937 99 ntBASIC3.49□□□□□ -1.85
SOX1O00570 MIR449C-201ENST00000516047 92 ntBASIC3.49□□□□□ -1.85
SOX1O00570 RNU6-948P-201ENST00000516374 107 ntBASIC3.49□□□□□ -1.85
SOX1O00570 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.49□□□□□ -1.85
SOX1O00570 AL590808.1-201ENST00000618696 141 ntBASIC3.49□□□□□ -1.85
SOX1O00570 AC006435.5-201ENST00000624486 112 ntBASIC3.49□□□□□ -1.85
SOX1O00570 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.49□□□□□ -1.85
SOX1O00570 AC009487.4-201ENST00000624969 3585 ntBASIC3.49□□□□□ -1.85
SOX1O00570 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SOX1O00570 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SOX1O00570 MFSD8-233ENST00000641482 4860 ntBASIC3.48□□□□□ -1.85
SOX1O00570 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.48□□□□□ -1.85
SOX1O00570 SNORA25.7-201ENST00000364375 127 ntBASIC3.48□□□□□ -1.85
SOX1O00570 RNU6-234P-201ENST00000365229 104 ntBASIC3.48□□□□□ -1.85
SOX1O00570 RNU6-1080P-201ENST00000383982 107 ntBASIC3.48□□□□□ -1.85
SOX1O00570 RNU6-1144P-201ENST00000384247 104 ntBASIC3.48□□□□□ -1.85
SOX1O00570 SNORA7.4-201ENST00000384249 137 ntBASIC3.48□□□□□ -1.85
SOX1O00570 MIR764-201ENST00000390811 85 ntBASIC3.48□□□□□ -1.85
SOX1O00570 RNY4P18-201ENST00000391107 89 ntBASIC3.48□□□□□ -1.85
SOX1O00570 AP000567.1-201ENST00000406413 156 ntBASIC3.48□□□□□ -1.85
SOX1O00570 RNU6-1077P-201ENST00000410506 102 ntBASIC3.48□□□□□ -1.85
SOX1O00570 RNU6-57P-201ENST00000411348 103 ntBASIC3.48□□□□□ -1.85
SOX1O00570 CYCSP49-201ENST00000420810 319 ntBASIC3.48□□□□□ -1.85
SOX1O00570 snoU13.23-201ENST00000458863 104 ntBASIC3.48□□□□□ -1.85
SOX1O00570 AC109329.2-201ENST00000519658 482 ntBASIC3.48□□□□□ -1.85
SOX1O00570 CYCSP26-201ENST00000534107 320 ntBASIC3.48□□□□□ -1.85
SOX1O00570 AL160236.1-201ENST00000556317 195 ntBASIC3.48□□□□□ -1.85
SOX1O00570 AC023043.3-201ENST00000593113 385 ntBASIC3.48□□□□□ -1.85
SOX1O00570 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.48□□□□□ -1.85
SOX1O00570 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SOX1O00570 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX1O00570 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX1O00570 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX1O00570 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.47□□□□□ -1.85
SOX1O00570 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX1O00570 SNORA71.1-201ENST00000364523 117 ntBASIC3.47□□□□□ -1.85
SOX1O00570 SNORD31B-201ENST00000364977 69 ntBASIC3.47□□□□□ -1.85
SOX1O00570 Y_RNA.432-201ENST00000384087 111 ntBASIC3.47□□□□□ -1.85
SOX1O00570 Y_RNA.525-201ENST00000384570 113 ntBASIC3.47□□□□□ -1.85
SOX1O00570 AC010531.2-201ENST00000465012 153 ntBASIC3.47□□□□□ -1.85
SOX1O00570 Y_RNA.692-201ENST00000516627 105 ntBASIC3.47□□□□□ -1.85
SOX1O00570 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.47□□□□□ -1.85
SOX1O00570 AL021707.8-201ENST00000609428 183 ntBASIC3.47□□□□□ -1.85
SOX1O00570 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX1O00570 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX1O00570 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.46□□□□□ -1.85
SOX1O00570 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SOX1O00570 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.85
SOX1O00570 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX1O00570 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX1O00570 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
SOX1O00570 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SOX1O00570 RNA5SP354-201ENST00000391247 136 ntBASIC3.46□□□□□ -1.86
SOX1O00570 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX1O00570 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.46□□□□□ -1.86
SOX1O00570 AL357134.1-201ENST00000445848 426 ntBASIC3.46□□□□□ -1.86
SOX1O00570 RNU6-1299P-201ENST00000516316 100 ntBASIC3.46□□□□□ -1.86
SOX1O00570 RNU6-63P-201ENST00000516690 95 ntBASIC3.46□□□□□ -1.86
SOX1O00570 AC027419.1-201ENST00000522976 328 ntBASIC3.46□□□□□ -1.86
SOX1O00570 MIR6129-201ENST00000616087 109 ntBASIC3.46□□□□□ -1.86
SOX1O00570 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms