Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-281P-201ENST00000384212 103 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.490-201ENST00000384413 102 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 U8.16-201ENST00000391279 133 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 AL355796.1-201ENST00000406706 323 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 BTF3P4-201ENST00000418852 495 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 CALM2P4-201ENST00000430810 426 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 AC010095.1-201ENST00000443543 144 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.76□□□□□ -2.29
SMKR1H3BMG3 RNU1-41P-201ENST00000516161 162 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 RNU6-947P-201ENST00000516264 106 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 RNU6-917P-201ENST00000516294 104 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 RNU1-48P-201ENST00000516400 162 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 AL158827.2-201ENST00000602494 330 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 AC080078.2-201ENST00000603766 501 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 SNORD114-21-201ENST00000606412 72 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 AL691447.3-201ENST00000635020 330 ntBASIC0.76□□□□□ -2.29
SMKR1H3BMG3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.76□□□□□ -2.29
SMKR1H3BMG3 ZNF299P-201ENST00000406845 1804 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
SMKR1H3BMG3 RNU6-595P-201ENST00000363944 107 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 SNORD114-24-201ENST00000365029 72 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 SNORA20B-201ENST00000384220 132 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 RNU6-306P-201ENST00000384617 107 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 SNORA67.5-201ENST00000391036 107 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 OOSP1P1-201ENST00000423265 274 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 OR9P1P-201ENST00000496431 281 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 AC022493.2-201ENST00000506122 481 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 RNU6-1114P-201ENST00000516022 107 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 RNU2-56P-201ENST00000516826 190 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 MIR4421-201ENST00000578133 69 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 MIR3684-201ENST00000579779 74 ntBASIC0.75□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 SNORA80D-201ENST00000384488 135 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 MIR200A-201ENST00000384875 90 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 RNU1-139P-201ENST00000391307 165 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 MTCYBP4-201ENST00000401524 249 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 RNU6-373P-201ENST00000411247 98 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 RPL23AP36-201ENST00000413895 458 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 MTND3P23-201ENST00000431980 347 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 RPL39P39-201ENST00000455840 151 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 SNORD124-201ENST00000459577 104 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 RNU6-341P-201ENST00000516973 96 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 MIR3942-201ENST00000585264 109 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 AC103810.9-201ENST00000606688 112 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 AC024614.3-201ENST00000637860 256 ntBASIC0.74□□□□□ -2.29
SMKR1H3BMG3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 MIR1289-2-201ENST00000408360 111 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC114482.1-201ENST00000418010 247 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 USP9YP16-201ENST00000430287 407 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC093850.1-201ENST00000454121 251 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 USP9YP23-201ENST00000455085 407 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 RPL39P28-201ENST00000465655 155 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC091021.1-201ENST00000468051 388 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC046134.1-201ENST00000514454 666 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 RNU7-12P-201ENST00000516030 62 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.706-201ENST00000516933 99 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AL121579.1-201ENST00000555129 305 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC091178.2-201ENST00000584401 117 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 AC100812.1-201ENST00000607622 580 ntBASIC0.73□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.267-201ENST00000364679 109 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 RNA5SP213-201ENST00000391031 106 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 RNA5SP482-201ENST00000391269 118 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.72□□□□□ -2.29
SMKR1H3BMG3 Y_RNA.595-201ENST00000410403 105 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.72□□□□□ -2.29
SMKR1H3BMG3 MTND3P21-201ENST00000433774 331 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 MTCO2P7-201ENST00000446518 666 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 PDCD5P2-201ENST00000507570 312 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.72□□□□□ -2.29
SMKR1H3BMG3 RNA5SP20-201ENST00000515976 84 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 RNU6-506P-201ENST00000516553 94 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 RNU6-314P-201ENST00000516574 104 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.72□□□□□ -2.29
SMKR1H3BMG3 AP002004.2-201ENST00000531656 154 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 AC093023.1-201ENST00000547375 507 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 AC090617.3-201ENST00000573670 475 ntBASIC0.72□□□□□ -2.29
SMKR1H3BMG3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SMKR1H3BMG3 AC005592.1-201ENST00000566527 1640 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SMKR1H3BMG3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SMKR1H3BMG3 SNORA1B-201ENST00000362535 133 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms