Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6-623P-201ENST00000363143 105 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.339-201ENST00000365325 102 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1329P-201ENST00000365664 107 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.533-201ENST00000384596 114 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 MIR521-1-201ENST00000384902 87 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 MIR1265-201ENST00000408444 86 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 COX6CP10-201ENST00000416832 224 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6-956P-201ENST00000458868 103 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 snoU13.27-201ENST00000459278 104 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RPL17P19-201ENST00000489069 552 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6-864P-201ENST00000516256 108 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6-948P-201ENST00000516374 107 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1332P-201ENST00000516666 104 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.704-201ENST00000516851 102 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP54-201ENST00000516951 92 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC027288.2-201ENST00000553028 243 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC245505.1-201ENST00000556398 224 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 MIR4422-201ENST00000581938 83 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC092794.2-201ENST00000620933 563 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC139792.2-201ENST00000624218 587 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 AC100821.1-201ENST00000523153 2479 ntBASIC0.54□□□□□ -2.32
COL6A6A6NMZ7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 RNU6-727P-201ENST00000363592 107 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.179-201ENST00000363844 90 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.256-201ENST00000364594 104 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1303P-201ENST00000364841 107 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 RNU6-996P-201ENST00000365438 107 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 SNORA67.2-201ENST00000384300 149 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 MIR597-201ENST00000384968 97 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 MIR517A-201ENST00000385001 87 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 snoU13.19-201ENST00000459148 104 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 ACA59.1-201ENST00000515966 143 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 AL118558.2-201ENST00000556294 238 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 ZNF519P2-201ENST00000557032 169 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 AC092747.3-201ENST00000603769 301 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 MIR8065-201ENST00000620577 100 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 AC010615.1-201ENST00000594254 1764 ntBASIC0.53□□□□□ -2.32
COL6A6A6NMZ7 RNU6-112P-201ENST00000363599 104 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 RNU6-271P-201ENST00000363858 105 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.301-201ENST00000364990 103 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 RNU6-38P-201ENST00000384085 107 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.473-201ENST00000384333 102 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 MIR181A1-201ENST00000385026 110 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 MIR891A-201ENST00000401237 79 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1186P-201ENST00000410429 97 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 MTCO3P29-201ENST00000432119 779 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 MTND5P15-201ENST00000434246 349 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 RPS3AP17-201ENST00000472594 777 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 RPS27P22-201ENST00000478056 241 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 AL163195.1-201ENST00000496941 348 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 AC091885.1-201ENST00000506658 268 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 RNU6-911P-201ENST00000516523 104 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 SNORA62.5-201ENST00000516634 120 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 AC024995.1-201ENST00000523014 93 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 AC005668.1-201ENST00000571142 476 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 AC009248.2-201ENST00000619826 254 ntBASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.53□□□□□ -2.33
COL6A6A6NMZ7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 SNORA22-201ENST00000383907 134 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 SNORA75-201ENST00000384158 137 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 SNORA22C-201ENST00000384614 134 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 MIR520A-201ENST00000384862 85 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.582-201ENST00000391023 95 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1093P-201ENST00000391194 107 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 RPL30P16-201ENST00000419341 429 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC245047.4-201ENST00000433189 144 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AL031667.1-201ENST00000440222 725 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC079354.2-201ENST00000453523 154 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1278P-201ENST00000516130 107 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC025423.5-201ENST00000550230 219 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 POLR3GP2-201ENST00000588366 668 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 SNRPGP20-201ENST00000604477 205 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AL357078.3-201ENST00000607528 618 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AL121890.5-201ENST00000620848 304 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC006001.4-201ENST00000622243 395 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC068205.3-201ENST00000636385 468 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 SNORA29-201ENST00000384183 140 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 MIR208B-201ENST00000401172 77 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 Z95118.1-201ENST00000421372 247 ntBASIC0.52□□□□□ -2.33
COL6A6A6NMZ7 AC245047.3-201ENST00000429428 127 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms