Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR320B2-201ENST00000408479 138 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU6-1001P-201ENST00000411265 100 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 USMG5P1-201ENST00000425964 177 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 USP9YP16-201ENST00000430287 407 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 USP9YP23-201ENST00000455085 407 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RPL30P15-201ENST00000457129 321 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.635-201ENST00000459041 101 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AC067942.3-201ENST00000512025 362 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU6-559P-201ENST00000516151 98 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU6-948P-201ENST00000516374 107 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 RNU6-856P-201ENST00000516959 98 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 SUMO2P18-201ENST00000518873 252 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AL121579.1-201ENST00000555129 305 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 FRG2DP-202ENST00000566967 323 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 MIR4801-201ENST00000582704 82 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AC005786.1-201ENST00000588553 154 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AC100812.1-201ENST00000607622 580 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 SNORD11B-201ENST00000607707 90 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 AP000648.3-201ENST00000623539 4507 ntBASIC1.27□□□□□ -2.21
NKX2-6A6NCS4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNA5SP361-201ENST00000362686 118 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU6-1188P-201ENST00000363795 107 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU1-96P-201ENST00000364163 162 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU6-417P-201ENST00000384712 107 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 MIR586-201ENST00000385035 97 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNA5SP212-201ENST00000391223 107 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AL117342.1-201ENST00000404861 406 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC016909.1-201ENST00000415916 166 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 snoU13.18-201ENST00000459483 104 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU6-277P-201ENST00000516272 106 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU6-344P-201ENST00000516635 111 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU6-107P-201ENST00000516643 102 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 SNORA31.17-201ENST00000516953 127 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC091144.1-201ENST00000519573 138 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC093023.1-201ENST00000547375 507 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 UBE2V2P2-201ENST00000587677 504 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC125232.2-201ENST00000592457 143 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 RBM11P1-201ENST00000604951 799 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AL357075.2-201ENST00000614906 189 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 U1.36-201ENST00000620684 176 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC092794.2-201ENST00000620933 563 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 AC068205.3-201ENST00000636385 468 ntBASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNU6-245P-201ENST00000384020 107 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNU6-890P-201ENST00000384121 107 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNU6-793P-201ENST00000384233 104 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNY3P14-201ENST00000384309 102 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNU6-700P-201ENST00000391043 107 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNA5SP467-201ENST00000391274 118 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 HMGN2P34-201ENST00000437647 269 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 AC022493.2-201ENST00000506122 481 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 AL117351.2-201ENST00000513571 157 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNU6-875P-201ENST00000516488 106 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 AC022868.1-201ENST00000517767 391 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 AC027419.1-201ENST00000522976 328 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 MIR4452-201ENST00000583004 71 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 SNORA4-201ENST00000584302 138 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 MIR6078-201ENST00000611069 100 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 AC010999.1-201ENST00000611856 324 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 MTND5P35-201ENST00000557537 1720 ntBASIC1.25□□□□□ -2.21
NKX2-6A6NCS4 RNU1-62P-201ENST00000362599 164 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 RNU6-112P-201ENST00000363599 104 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 RNU6-280P-201ENST00000364145 104 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 RNU6-879P-201ENST00000364328 108 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.356-201ENST00000365475 113 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.490-201ENST00000384413 102 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 Y_RNA.529-201ENST00000384586 119 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC245047.4-201ENST00000433189 144 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 HSPE1P24-201ENST00000450782 238 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 RNU6-498P-201ENST00000459468 107 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC114982.1-201ENST00000469402 321 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 AC105758.1-201ENST00000506038 399 ntBASIC1.24□□□□□ -2.21
NKX2-6A6NCS4 RNU6-1114P-201ENST00000516022 107 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms