Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC105029.1-201ENST00000520250 669 ntBASIC1.33□□□□□ -2.2
SMIM28A0A1B0GU29 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
SMIM28A0A1B0GU29 MIR8070-201ENST00000616510 88 ntBASIC1.33□□□□□ -2.2
SMIM28A0A1B0GU29 AC095038.3-201ENST00000634439 195 ntBASIC1.33□□□□□ -2.2
SMIM28A0A1B0GU29 U6.108-201ENST00000637764 58 ntBASIC1.33□□□□□ -2.2
SMIM28A0A1B0GU29 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.33□□□□□ -2.2
SMIM28A0A1B0GU29 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.33□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-845P-201ENST00000362578 103 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-593P-201ENST00000364716 112 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 RNA5SP467-201ENST00000391274 118 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 USP9YP16-201ENST00000430287 407 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 RBMX2P4-201ENST00000441256 376 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 AL606517.2-201ENST00000442855 241 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 USP9YP23-201ENST00000455085 407 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 AC025465.3-201ENST00000510570 311 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 AC046134.1-201ENST00000514454 666 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 SCARNA16.2-201ENST00000516520 172 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.691-201ENST00000516611 103 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-1198P-201ENST00000516904 67 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.706-201ENST00000516933 99 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.708-201ENST00000516950 96 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 AC091144.1-201ENST00000519573 138 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 FRG2DP-202ENST00000566967 323 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 AC100812.1-201ENST00000607622 580 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 AC091895.1-201ENST00000624494 256 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 MTND5P16-201ENST00000460269 1703 ntBASIC1.32□□□□□ -2.2
SMIM28A0A1B0GU29 RNA5SP361-201ENST00000362686 118 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.166-201ENST00000363730 102 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-1283P-201ENST00000365314 105 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 MIR1185-2-201ENST00000408687 86 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-120P-201ENST00000516077 103 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 RNU7-128P-201ENST00000517247 62 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 AC093023.1-201ENST00000547375 507 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 SNORA77B-201ENST00000578179 125 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 AL357075.2-201ENST00000614906 189 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 MIR8074-201ENST00000615081 81 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SMIM28A0A1B0GU29 RNY1P16-201ENST00000363063 111 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 U3.8-201ENST00000363675 217 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-280P-201ENST00000364145 104 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 SNORD81.2-201ENST00000365153 76 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-281P-201ENST00000384212 103 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.482-201ENST00000384377 111 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 USMG5P1-201ENST00000425964 177 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 EIF1P2-201ENST00000428233 350 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AC005002.2-201ENST00000438228 269 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AC074290.1-201ENST00000448883 135 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AC093852.1-201ENST00000503587 266 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AC010999.1-201ENST00000611856 324 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AC122108.2-201ENST00000611946 526 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 AL669831.3-213ENST00000636676 183 ntBASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
SMIM28A0A1B0GU29 MTND5P35-201ENST00000557537 1720 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.179-201ENST00000363844 90 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-997P-201ENST00000384725 107 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 RNA5SP109-201ENST00000391010 116 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 SNORA75.4-201ENST00000391278 119 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 MIR190B-201ENST00000401119 79 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-1304P-201ENST00000411374 106 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 AL161935.2-201ENST00000414627 60 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 AC073910.1-201ENST00000445047 438 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 MTND4P18-201ENST00000447010 465 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 RPS27P1-201ENST00000450552 247 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 NDUFB4P10-201ENST00000452541 359 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 AC116353.2-201ENST00000505332 712 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 AC005668.1-201ENST00000571142 476 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 7SK.7-201ENST00000603504 247 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 AC022306.2-201ENST00000617563 647 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 TPTEP1-208ENST00000636884 213 ntBASIC1.29□□□□□ -2.2
SMIM28A0A1B0GU29 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.67-201ENST00000362870 100 ntBASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 RNU1-22P-201ENST00000363334 158 ntBASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 RNU2-7P-201ENST00000410794 178 ntBASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 AC008134.1-201ENST00000420943 193 ntBASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 Y_RNA.683-201ENST00000516508 93 ntBASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 AC080078.3-201ENST00000605407 463 ntBASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
SMIM28A0A1B0GU29 RNU6-414P-201ENST00000363705 104 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 324.7 ms