Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL157398.1-201ENST00000452981 186 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC245047.8-201ENST00000456455 284 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 SNORA19.2-201ENST00000516013 114 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 SNORA40.12-201ENST00000516329 111 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 RNU4-54P-201ENST00000516428 129 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-58P-201ENST00000517143 103 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC027419.1-201ENST00000522976 328 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC023157.2-201ENST00000540596 141 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 MIR4528-201ENST00000577763 90 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC109347.2-201ENST00000610220 349 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 MIR6513-201ENST00000621188 64 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC005592.1-201ENST00000566527 1640 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MIRLET7C-201ENST00000362160 84 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-873P-201ENST00000363833 107 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 SNORA2.2-201ENST00000365473 135 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 RNU5A-6P-201ENST00000384136 116 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MIR526A1-201ENST00000384897 85 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AC073464.1-201ENST00000429823 534 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MRPS10P1-201ENST00000448483 130 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 RPL39P39-201ENST00000455840 151 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 SNORD65B-201ENST00000459126 73 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 RNU7-90P-201ENST00000459216 62 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 RNU7-94P-201ENST00000459576 63 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MTND3P7-201ENST00000474435 343 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AC091179.3-201ENST00000474761 144 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AC098869.1-201ENST00000481627 292 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MTCO1P29-201ENST00000496868 288 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 SNORA25.14-201ENST00000516481 132 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 RNA5SP54-201ENST00000516951 92 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MTND1P24-201ENST00000552175 861 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AC027288.2-201ENST00000553028 243 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AL357312.1-201ENST00000603879 298 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AC004832.4-201ENST00000608952 331 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AL133215.3-201ENST00000609801 448 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AL391903.3-201ENST00000612158 163 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AC022709.1-201ENST00000615967 87 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 AL158209.2-201ENST00000619266 216 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MIR6079-201ENST00000635807 62 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
TRAV41A0A0B4J266 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 SNORD113-7-201ENST00000363762 77 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 MIR32-201ENST00000384965 70 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 RN7SKP142-201ENST00000411236 328 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 MTCO1P20-201ENST00000425366 358 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 RNU7-187P-201ENST00000458985 68 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-1132P-201ENST00000459214 107 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 RPS27P22-201ENST00000478056 241 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 SNORD111.1-201ENST00000516421 86 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-405P-201ENST00000516637 110 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-1332P-201ENST00000516666 104 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AC018659.1-201ENST00000551083 169 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 MIR3192-201ENST00000584920 77 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AL512605.2-201ENST00000592972 256 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 SNORA28-201ENST00000606769 126 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AC092807.2-201ENST00000609367 243 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AL603755.1-201ENST00000619504 163 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 AC091931.1-201ENST00000623488 728 ntBASIC0.37□□□□□ -2.35
TRAV41A0A0B4J266 CASC19-280ENST00000642102 1351 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 Y_RNA.265-201ENST00000364677 108 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 SNORA72.3-201ENST00000365074 132 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 Y_RNA.319-201ENST00000365138 92 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 RNU4-66P-201ENST00000365199 138 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AL590002.1-201ENST00000406554 418 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 MTND4P18-201ENST00000447010 465 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 snoU13.18-201ENST00000459483 104 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-1208P-201ENST00000459588 107 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 HMGN2P26-201ENST00000463169 339 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC091021.1-201ENST00000468051 388 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC010469.2-201ENST00000496412 480 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 Y_RNA.654-201ENST00000497848 106 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 RNA5SP401-201ENST00000515920 127 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 SNORA70.12-201ENST00000516084 153 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 AC007834.2-201ENST00000536310 343 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 UBL5P4-201ENST00000562584 236 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 MTATP6P24-201ENST00000576835 677 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
TRAV41A0A0B4J266 SNORA1B-201ENST00000362535 133 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-1266P-201ENST00000362794 105 ntBASIC0.35□□□□□ -2.35
TRAV41A0A0B4J266 SNORD115-32-201ENST00000364079 82 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms