Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.12□□□□□ -2.07
CYP46A1Q9Y6A2 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
CYP46A1Q9Y6A2 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
CYP46A1Q9Y6A2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CYP46A1Q9Y6A2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 SNORD114-1-201ENST00000362705 72 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 Y_RNA.58-201ENST00000362807 102 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 Y_RNA.154-201ENST00000363624 102 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 RNY3P1-201ENST00000365085 102 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 RNY3-201ENST00000365484 102 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 RNU6-1040P-201ENST00000383974 107 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 MIR329-1-201ENST00000385028 80 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 MIR548B-201ENST00000385247 97 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 Y_RNA.605-201ENST00000410577 105 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 RNU6-1001P-201ENST00000411265 100 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 AC008134.1-201ENST00000420943 193 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 AC060773.1-201ENST00000421698 310 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 AC011406.1-201ENST00000512440 370 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 RNU6-107P-201ENST00000516643 102 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 AC024614.2-201ENST00000577584 372 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 AC125232.2-201ENST00000592457 143 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.11□□□□□ -2.07
CYP46A1Q9Y6A2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 RNU5E-4P-201ENST00000364931 120 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 Y_RNA.314-201ENST00000365114 102 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 RNU6-1145P-201ENST00000384246 107 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 MIR1253-201ENST00000408273 105 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 RNU7-152P-201ENST00000458982 64 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 AC105758.1-201ENST00000506038 399 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 RAB11AP2-201ENST00000545905 639 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 AC015712.3-201ENST00000559380 164 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 MIR3618-201ENST00000580330 88 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 AC006001.4-201ENST00000622243 395 ntBASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CYP46A1Q9Y6A2 SNORD48-201ENST00000364953 64 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 SNORA8-201ENST00000384574 139 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 MIR1185-2-201ENST00000408687 86 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 Y_RNA.592-201ENST00000410274 109 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 MTND4P28-201ENST00000426217 387 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 UQCRBP2-201ENST00000447827 297 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 PCNPP5-201ENST00000452246 481 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 U8.22-201ENST00000459141 133 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 RNU6-221P-201ENST00000459541 99 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 RNVU1-2-201ENST00000516326 135 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 RN7SKP49-201ENST00000516675 260 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 AC087588.2-201ENST00000617667 426 ntBASIC2.09□□□□□ -2.07
CYP46A1Q9Y6A2 RNU4-79P-201ENST00000362764 141 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 RNU6-862P-201ENST00000362804 105 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 Y_RNA.428-201ENST00000384078 102 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 MIR559-201ENST00000385188 96 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 AC074133.1-201ENST00000515696 183 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 RNU6-699P-201ENST00000517081 110 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 MIR5094-201ENST00000578766 85 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 AL109918.3-201ENST00000603072 338 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 ZNF72P-201ENST00000425869 1908 ntBASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CYP46A1Q9Y6A2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 RNA5SP361-201ENST00000362686 118 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 RNU6-1266P-201ENST00000362794 105 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 RNU1-96P-201ENST00000364163 162 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 RNU6-1240P-201ENST00000365155 104 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 Y_RNA.431-201ENST00000384086 102 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 SNORA40.18-201ENST00000391200 128 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 MIR1289-2-201ENST00000408360 111 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AL591806.2-201ENST00000433122 173 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 SNORD116.3-201ENST00000517176 78 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AC025647.1-201ENST00000517879 253 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AK6P2-201ENST00000549020 471 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AL117336.2-201ENST00000602435 335 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AL353149.1-201ENST00000610667 244 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 AC022513.1-201ENST00000624512 117 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.07□□□□□ -2.08
CYP46A1Q9Y6A2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.06□□□□□ -2.08
CYP46A1Q9Y6A2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CYP46A1Q9Y6A2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms