Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 snoZ196.1-201ENST00000625269 89 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 MIR3674-201ENST00000636576 68 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.143-201ENST00000363520 106 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.210-201ENST00000364161 110 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RNA5SP126-201ENST00000365092 109 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.459-201ENST00000384251 102 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 MIR29C-201ENST00000385231 88 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RN7SKP284-201ENST00000411002 343 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 TOMM22P2-201ENST00000430735 237 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-498P-201ENST00000459468 107 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AC067942.3-201ENST00000512025 362 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RNU2-34P-201ENST00000516534 121 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 MIR514B-201ENST00000516774 80 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AC131281.1-201ENST00000522984 164 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AC005176.2-201ENST00000596933 147 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AL109918.3-201ENST00000603072 338 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AL355297.3-201ENST00000604082 446 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 AC006001.4-201ENST00000622243 395 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 LINC02555-201ENST00000563933 1951 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.17□□□□□ -2.06
CLDN16Q9Y5I7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.145-201ENST00000363527 102 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 SNORA63C-201ENST00000364578 129 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 SNORA80E-201ENST00000384744 137 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 MIR1185-2-201ENST00000408687 86 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 RNU2-20P-201ENST00000410425 191 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 MTND2P23-201ENST00000422990 651 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 RPS15AP28-201ENST00000435088 386 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 MTCO1P44-201ENST00000441935 243 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 RPL26P26-201ENST00000480251 434 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 RNY3P15-201ENST00000516297 97 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 RNA5SP281-201ENST00000516504 135 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 AP005660.1-201ENST00000522972 293 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 AL021879.1-201ENST00000611756 288 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 PART1_1.1-201ENST00000611761 217 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 AC004467.1-201ENST00000615678 330 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 AL590240.4-201ENST00000616908 390 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.16□□□□□ -2.06
CLDN16Q9Y5I7 AL159152.1-201ENST00000635019 2587 ntBASIC2.15□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-23P-201ENST00000363283 107 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-738P-201ENST00000384531 106 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 SNORA3.2-201ENST00000408221 125 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 U3.40-201ENST00000408706 208 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 AL357134.1-201ENST00000445848 426 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 MRPS35P2-201ENST00000508242 191 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-897P-201ENST00000517135 105 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 RAC1P9-201ENST00000604990 392 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 AL590808.1-201ENST00000618696 141 ntBASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.153-201ENST00000363615 91 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 SNORD114-6-201ENST00000364393 72 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-937P-201ENST00000384325 106 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 RNU11-3P-201ENST00000391111 133 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 MIR1253-201ENST00000408273 105 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-130P-201ENST00000411112 103 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1046P-201ENST00000516538 107 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 AC116312.1-201ENST00000606841 314 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN16Q9Y5I7 AC080100.1-201ENST00000624239 5356 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.183-201ENST00000363882 113 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNA5SP493-201ENST00000364115 91 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 SNORD114-30-201ENST00000364448 72 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNU5A-5P-201ENST00000411054 116 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AC008134.1-201ENST00000420943 193 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 BX510359.4-201ENST00000423750 193 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AC005002.2-201ENST00000438228 269 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 MTND5P22-201ENST00000458380 195 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-221P-201ENST00000459541 99 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms