Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-755P-201ENST00000364400 103 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 Y_RNA.332-201ENST00000365271 113 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 Y_RNA.625-201ENST00000411256 107 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 TRBV12-2-201ENST00000489763 344 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-504P-201ENST00000516568 104 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-856P-201ENST00000516959 98 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 PRELID2P1-201ENST00000552837 301 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 PARP1P2-201ENST00000556806 195 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 AC108081.1-201ENST00000604358 221 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 U2.20-201ENST00000613956 192 ntBASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA11Q9Y5H2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR95-201ENST00000385072 81 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR624-201ENST00000385217 97 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR548A3-201ENST00000385297 97 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 SNORA3.3-201ENST00000408712 125 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU2-63P-201ENST00000410792 194 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 AC002075.2-201ENST00000425207 252 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 HMGN2P34-201ENST00000437647 269 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 RN7SKP83-201ENST00000516512 178 ntBASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHGA11Q9Y5H2 MAPK10-322ENST00000641485 4530 ntBASIC3.65□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR372-201ENST00000362225 67 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.242-201ENST00000364473 110 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 AL513477.1-202ENST00000417061 214 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 RN7SL385P-201ENST00000468873 276 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 SNORA48.11-201ENST00000517015 89 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 CYCSP30-201ENST00000546447 172 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 AL356280.1-201ENST00000603614 379 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 ZYXP1-201ENST00000617638 118 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA11Q9Y5H2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 SNORA68.1-201ENST00000364537 132 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.486-201ENST00000384398 107 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU6-628P-201ENST00000410675 107 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU1-104P-201ENST00000517280 175 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 AL365205.2-201ENST00000594586 68 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 SNORA62.6-201ENST00000606322 83 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 AL121890.5-201ENST00000620848 304 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 RNA5SP196-201ENST00000625967 102 ntBASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PCDHGA11Q9Y5H2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU1-96P-201ENST00000364163 162 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.346-201ENST00000365385 112 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RNA5SP283-201ENST00000365604 119 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RNA5SP424-201ENST00000390988 115 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU6-1186P-201ENST00000410429 97 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RN7SL323P-201ENST00000494712 295 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 AC023141.11-201ENST00000508864 202 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU6-991P-201ENST00000516168 107 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU7-99P-201ENST00000516271 62 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 AC022695.1-201ENST00000522089 237 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 AC007224.1-201ENST00000564410 144 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 MIR4679-2-201ENST00000578358 77 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 MIR4286-201ENST00000580651 93 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 AC091178.2-201ENST00000584401 117 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 AC007229.1-201ENST00000590455 412 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 AC073413.2-201ENST00000604332 360 ntBASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGA11Q9Y5H2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU6-309P-201ENST00000364573 106 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 SNORD58C-201ENST00000365223 64 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 SNORD116-21-201ENST00000384507 92 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 MIR184-201ENST00000384962 84 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 MIR561-201ENST00000385216 97 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.617-201ENST00000410920 90 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms