Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC103810.1-201ENST00000579873 453 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AC078899.2-201ENST00000595282 212 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AC244505.7-201ENST00000599675 272 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 Y_RNA.191-201ENST00000363972 113 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 SNORA71.2-201ENST00000364941 134 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 Y_RNA.565-201ENST00000384719 101 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 RNA5SP144-201ENST00000410846 116 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 AL022718.1-201ENST00000412004 84 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 HMGN2P18-201ENST00000450680 270 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 RPL23AP63-201ENST00000498752 471 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 SNORA4.4-201ENST00000515921 135 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 AF117829.1-206ENST00000621883 3802 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 AC095038.3-201ENST00000634439 195 ntBASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA4Q9Y5G9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 SNORD14E-201ENST00000364009 85 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-743P-201ENST00000364151 106 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 Y_RNA.267-201ENST00000364679 109 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 RNA5SP167-201ENST00000365461 116 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 RN7SKP200-201ENST00000410564 320 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 AL139247.1-201ENST00000422768 325 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 AL512326.2-201ENST00000426359 151 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 HMGN2P31-201ENST00000432430 273 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 HMGN2P34-201ENST00000437647 269 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 RNA5SP309-201ENST00000516670 106 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 AP005019.3-201ENST00000620418 560 ntBASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA4Q9Y5G9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 AL049781.1-201ENST00000623195 3585 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-268P-201ENST00000364174 107 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 Y_RNA.299-201ENST00000364973 94 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 SNORD58A-201ENST00000383875 65 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-1201P-201ENST00000384227 107 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 SNORA37-201ENST00000384504 129 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 MIR23B-201ENST00000384832 97 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 AC087499.4-201ENST00000448505 178 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 IGLV3-26-201ENST00000520756 302 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 MIR4439-201ENST00000583746 80 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 MIR6079-201ENST00000635807 62 ntBASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PCDHGA4Q9Y5G9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
PCDHGA4Q9Y5G9 AC021146.4-201ENST00000309229 279 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 SNORA70C-201ENST00000384538 135 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 AL627390.1-201ENST00000396055 340 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 RNU4-69P-201ENST00000410677 143 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 MIR3138-201ENST00000585238 82 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 AC002984.1-201ENST00000591692 448 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 AC096720.1-201ENST00000604441 183 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 AC012531.5-201ENST00000611375 151 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 ZYXP1-201ENST00000617638 118 ntBASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA4Q9Y5G9 AC008264.2-201ENST00000610193 3731 ntBASIC4.39□□□□□ -1.71
PCDHGA4Q9Y5G9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA4Q9Y5G9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHGA4Q9Y5G9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.39□□□□□ -1.71
PCDHGA4Q9Y5G9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms