Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 SNORA63.1-201ENST00000362493 131 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 Y_RNA.66-201ENST00000362862 102 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 SNORA73.2-201ENST00000364946 201 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 SNORA5A-201ENST00000384111 134 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 Y_RNA.549-201ENST00000384657 102 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 Z98941.1-201ENST00000407764 100 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 MIR1302-5-201ENST00000408164 150 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 AC063976.3-201ENST00000426849 329 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 RPL30P4-201ENST00000429309 333 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 CALM2P4-201ENST00000430810 426 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 HMGN2P31-201ENST00000432430 273 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 RNU6-948P-201ENST00000516374 107 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 AC109329.2-201ENST00000519658 482 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 MIR3117-201ENST00000584034 78 ntBASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGC4Q9Y5F7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 AL596211.1-201ENST00000569873 2277 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RNU6-234P-201ENST00000365229 104 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RNU6-418P-201ENST00000384035 107 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RNU6-49P-201ENST00000384256 107 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RNU1-89P-201ENST00000384592 164 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 MIR570-201ENST00000384917 97 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 AC104619.4-201ENST00000510773 249 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RNA5SP236-201ENST00000516169 116 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RN7SKP83-201ENST00000516512 178 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RNU6-762P-201ENST00000517107 102 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 AC013412.1-201ENST00000610687 192 ntBASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGC4Q9Y5F7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 SNORA1-201ENST00000384107 130 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 SNORA51.10-201ENST00000384418 136 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 RNA5SP136-201ENST00000410906 107 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 RN7SL93P-201ENST00000463035 293 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 RN7SL807P-201ENST00000470923 297 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 AC011604.1-201ENST00000545978 196 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 AC110741.2-201ENST00000605278 268 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 AF117829.1-206ENST00000621883 3802 ntBASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHGC4Q9Y5F7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGC4Q9Y5F7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGC4Q9Y5F7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGC4Q9Y5F7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.65□□□□□ -1.82
PCDHGC4Q9Y5F7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 RNU1-22P-201ENST00000363334 158 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 SNORD31B-201ENST00000364977 69 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 RNU6-1240P-201ENST00000365155 104 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 Y_RNA.558-201ENST00000384685 113 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 AL590004.2-201ENST00000404787 371 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 AC016909.1-201ENST00000415916 166 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 DBIP2-201ENST00000419076 262 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 AC008134.1-201ENST00000420943 193 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 AC017083.1-201ENST00000428093 483 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 AC006445.1-201ENST00000491925 405 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 RN7SKP18-201ENST00000516005 275 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 RNU6-504P-201ENST00000516568 104 ntBASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PCDHGC4Q9Y5F7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 RNU1-18P-201ENST00000363062 164 ntBASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 AC096725.1-201ENST00000514266 313 ntBASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 SNORA40.13-201ENST00000516379 120 ntBASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 SNORA70.18-201ENST00000516696 98 ntBASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 AL161756.2-201ENST00000604597 246 ntBASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 JPX_2.1-201ENST00000614161 69 ntBASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 AC012314.7-201ENST00000619693 93 ntBASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGC4Q9Y5F7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGC4Q9Y5F7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms