Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 RNU6-1205P-201ENST00000363625 106 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 Y_RNA.293-201ENST00000364908 93 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 MIR873-201ENST00000401120 77 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 MIR1294-201ENST00000408503 142 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 AC074290.1-201ENST00000448883 135 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 RPL23AP7-203ENST00000449021 469 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 AC114982.1-201ENST00000469402 321 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 RPL36AP21-201ENST00000490372 323 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 RNU6-237P-201ENST00000515985 71 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 RNU6-479P-201ENST00000516348 105 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 SNORD116-25-201ENST00000516517 92 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 RNU6-711P-201ENST00000517255 106 ntBASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.05□□□□□ -1.92
SIT1Q9Y3P8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 AC010409.1-201ENST00000487382 476 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 AC107027.2-201ENST00000512197 115 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 SNORD59.2-201ENST00000516873 68 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 AC109810.1-201ENST00000534066 224 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 AC091564.4-201ENST00000533934 2194 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 Z82209.1-201ENST00000422141 2135 ntBASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIT1Q9Y3P8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 AC018555.1-201ENST00000567548 1980 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 RNU4-10P-201ENST00000364383 140 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 RNU6-22P-201ENST00000384355 107 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 MIR569-201ENST00000385228 96 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 Y_RNA.586-201ENST00000391146 98 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 RNU2-51P-201ENST00000410708 197 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 RNU7-170P-201ENST00000459303 61 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 RNU6-221P-201ENST00000459541 99 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 SCARNA8-201ENST00000515924 131 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 MIR4738-201ENST00000579134 87 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 AC090616.3-201ENST00000582184 217 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 AC110079.1-202ENST00000635213 138 ntBASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIT1Q9Y3P8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 Y_RNA.24-201ENST00000362508 103 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU1-72P-201ENST00000362976 153 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU6-271P-201ENST00000363858 105 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU6-151P-201ENST00000364158 107 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU6-234P-201ENST00000365229 104 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU6-975P-201ENST00000384296 105 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 AL355796.1-201ENST00000406706 323 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 Z98941.1-201ENST00000407764 100 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU7-14P-201ENST00000459331 62 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU7-57P-201ENST00000459540 60 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 SCARNA17.1-201ENST00000516211 143 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 SCARNA17.2-201ENST00000516334 143 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 RNU6-62P-201ENST00000516526 102 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 AC109329.2-201ENST00000519658 482 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 AC079600.2-201ENST00000550076 130 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 MIR548X2-201ENST00000579776 100 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 MIR4753-201ENST00000585119 83 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 DNAJC19P2-201ENST00000593340 302 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 SCARNA17.4-201ENST00000614296 143 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 snoZ196.1-201ENST00000625269 89 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 MAPK10-266ENST00000641066 6555 ntBASIC3.02□□□□□ -1.93
SIT1Q9Y3P8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 MIR423-201ENST00000362201 94 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 SNORA27.1-201ENST00000362604 124 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 SNORD31B-201ENST00000364977 69 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 RNU6-969P-201ENST00000383900 105 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 SNORA20B-201ENST00000384220 132 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 RNU6-1274P-201ENST00000384557 107 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 RNU6-1228P-201ENST00000391014 107 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 SNORD109B-201ENST00000458961 67 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 SNORD109A-201ENST00000459128 67 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 UBL5P3-201ENST00000475112 231 ntBASIC3.01□□□□□ -1.93
SIT1Q9Y3P8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms