Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL355796.1-201ENST00000406706 323 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 MRPS10P2-201ENST00000431226 381 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 MRPS10P1-201ENST00000448483 130 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 AC117454.1-201ENST00000491120 168 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 DEFB108E-201ENST00000524692 240 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 MIR4438-201ENST00000585271 93 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 AC040904.1-201ENST00000590850 223 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 PRELID3BP2-201ENST00000605362 201 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 Y_RNA.169-201ENST00000363745 96 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 Y_RNA.265-201ENST00000364677 108 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 SNORA25.9-201ENST00000365087 128 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 SNORD37.1-201ENST00000390968 65 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 MIR450B-201ENST00000401182 78 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 MIR1276-201ENST00000408707 83 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 RPEP5-201ENST00000441137 268 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 AC245047.8-201ENST00000456455 284 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 AC092436.3-201ENST00000511788 257 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 SNORA40.12-201ENST00000516329 111 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 SNORA25.14-201ENST00000516481 132 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 AC004832.4-201ENST00000608952 331 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 AC091931.1-201ENST00000623488 728 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 MIR6079-201ENST00000635807 62 ntBASIC0.59□□□□□ -2.31
RHBDD3Q9Y3P4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 Y_RNA.4-201ENST00000362333 112 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-280P-201ENST00000364145 104 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 SNORD114-22-201ENST00000365423 72 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 MIR153-2-201ENST00000385225 87 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 EIF4E2P1-201ENST00000393781 255 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 MTCO3P19-201ENST00000415864 321 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 MTCO2P16-201ENST00000436962 677 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 Y_RNA.676-201ENST00000516393 96 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-58P-201ENST00000517143 103 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 AP002001.1-203ENST00000534002 267 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 AC016957.1-201ENST00000534895 309 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 MTND1P24-201ENST00000552175 861 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 FRG2DP-202ENST00000566967 323 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 FAM106DP-201ENST00000586416 501 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 AC024933.1-201ENST00000608472 348 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 AL133215.3-201ENST00000609801 448 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 AL158063.1-201ENST00000615349 536 ntBASIC0.58□□□□□ -2.32
RHBDD3Q9Y3P4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 Y_RNA.319-201ENST00000365138 92 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 MTCO2P19-201ENST00000427513 598 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 AL445305.1-201ENST00000432577 575 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 AL031667.1-201ENST00000440222 725 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 AL049830.1-201ENST00000468034 425 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 AC113410.1-201ENST00000505029 247 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 RNU2-56P-201ENST00000516826 190 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.57□□□□□ -2.32
RHBDD3Q9Y3P4 ELL2P3-201ENST00000457883 1602 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 SNORD87-201ENST00000364849 89 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 RNA5SP482-201ENST00000391269 118 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 CALM2P3-201ENST00000400429 449 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 CALM2P4-201ENST00000430810 426 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 AL445567.1-201ENST00000439121 144 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 AL353572.1-201ENST00000442490 417 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 TPT1P7-201ENST00000458300 517 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 AC010598.1-201ENST00000510378 103 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 RNA5SP401-201ENST00000515920 127 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 RPL21P9-201ENST00000556149 474 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 CYP3A137P-201ENST00000562436 69 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 MIR3684-201ENST00000579779 74 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 AL121757.2-201ENST00000611223 313 ntBASIC0.56□□□□□ -2.32
RHBDD3Q9Y3P4 RNU4-66P-201ENST00000365199 138 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-128P-201ENST00000383976 107 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-38P-201ENST00000384085 107 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-793P-201ENST00000384233 104 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 SNORA75.2-201ENST00000391138 150 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 SNORA75.3-201ENST00000391231 150 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 U8.16-201ENST00000391279 133 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 MTCO1P20-201ENST00000425366 358 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 AL606489.2-201ENST00000433886 234 ntBASIC0.55□□□□□ -2.32
RHBDD3Q9Y3P4 RNU6-1208P-201ENST00000459588 107 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 1320.4 ms