Protein–RNA interactions for Protein: Q9Y2K2

SIK3, Serine/threonine-protein kinase SIK3, humanhuman

Predictions only

Length 1,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3Q9Y2K2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.8□□□□□ -1.96
SIK3Q9Y2K2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 Y_RNA.101-201ENST00000363154 102 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 SNORD87-201ENST00000364849 89 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 RNU6-546P-201ENST00000383991 107 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 RNA5SP504-201ENST00000410676 117 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 SNORA48.11-201ENST00000517015 89 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 GTF3AP2-201ENST00000557014 266 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 MIR3684-201ENST00000579779 74 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 MIR5092-201ENST00000583139 88 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 MIR4753-201ENST00000585119 83 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 AL162424.1-201ENST00000602325 221 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 SCARNA4.1-201ENST00000628597 123 ntBASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
SIK3Q9Y2K2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 UBE2WP1-201ENST00000362030 340 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 Y_RNA.111-201ENST00000363248 100 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 SNORA5B-201ENST00000363786 132 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 Y_RNA.269-201ENST00000364685 89 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 Y_RNA.275-201ENST00000364726 110 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 Y_RNA.418-201ENST00000384029 102 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 RNU6-1248P-201ENST00000391096 64 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 MIR1283-1-201ENST00000408494 87 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 RNU2-14P-201ENST00000411053 191 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 MTCO1P5-201ENST00000433573 344 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 RPL23AP3-201ENST00000453844 468 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AC091959.1-201ENST00000495857 238 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 RNU6-155P-201ENST00000516347 100 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AC022616.8-201ENST00000533569 253 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AP002001.1-203ENST00000534002 267 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AC130289.1-201ENST00000577321 73 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AL109918.3-201ENST00000603072 338 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 AC010297.1-201ENST00000623948 149 ntBASIC2.78□□□□□ -1.96
SIK3Q9Y2K2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
SIK3Q9Y2K2 AC009487.4-201ENST00000624969 3585 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.200-201ENST00000364018 102 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AL357139.1-201ENST00000407792 426 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AL139156.1-201ENST00000412785 841 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AC009963.1-201ENST00000417265 157 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 MRPS10P1-201ENST00000448483 130 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 SNORA27.4-201ENST00000516650 95 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 RNU6-182P-201ENST00000516970 105 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AC098479.1-201ENST00000609225 154 ntBASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SIK3Q9Y2K2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 SNORD31B-201ENST00000364977 69 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 MIR561-201ENST00000385216 97 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 RNU2-32P-201ENST00000411193 191 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 RNU6-1199P-201ENST00000411249 104 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 AC024067.1-201ENST00000426199 223 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 SUMO1P2-201ENST00000452524 304 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 HMGN2P9-201ENST00000476875 229 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 MIR449C-201ENST00000516047 92 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 RNU2-12P-201ENST00000517216 168 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 MIR4643-201ENST00000577473 78 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 ELOCP29-201ENST00000588193 334 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 AL512605.2-201ENST00000592972 256 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 AL355297.2-201ENST00000604792 129 ntBASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.76□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.29-201ENST00000362570 113 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.82-201ENST00000363000 102 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.92-201ENST00000363043 102 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.117-201ENST00000363294 101 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.235-201ENST00000364412 102 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 RNU6-740P-201ENST00000364734 105 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.306-201ENST00000365015 102 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.312-201ENST00000365089 102 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.322-201ENST00000365151 102 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 RNU6-438P-201ENST00000365561 103 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 MIR1298-201ENST00000408783 112 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 RPS12P2-201ENST00000439728 269 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 Y_RNA.650-201ENST00000459002 102 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 COX6CP14-201ENST00000469580 174 ntBASIC2.75□□□□□ -1.97
SIK3Q9Y2K2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms