Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NOD1Q9Y239 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NOD1Q9Y239 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NOD1Q9Y239 RNU6-915P-201ENST00000364943 103 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 RNU6-1240P-201ENST00000365155 104 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 RNU6-117P-201ENST00000365415 107 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NOD1Q9Y239 Z82209.1-201ENST00000422141 2135 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 NDUFB1P1-201ENST00000435191 180 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 RPS12P18-201ENST00000442381 270 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 RAC1P5-201ENST00000512182 576 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.87□□□□□ -1.79
NOD1Q9Y239 AL021707.8-201ENST00000609428 183 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
NOD1Q9Y239 MIR7112-201ENST00000616126 65 ntBASIC3.87□□□□□ -1.79
NOD1Q9Y239 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NOD1Q9Y239 RNA5SP139-201ENST00000364340 117 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 RNU6-1080P-201ENST00000383982 107 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 RNU6-136P-201ENST00000384663 107 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.86□□□□□ -1.79
NOD1Q9Y239 AC016909.1-201ENST00000415916 166 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 FCF1P8-201ENST00000510322 597 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 RNU6-197P-201ENST00000516680 100 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 AL049861.1-201ENST00000603130 150 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.86□□□□□ -1.79
NOD1Q9Y239 YPEL5P2-201ENST00000605553 359 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 MIR1248-201ENST00000629190 106 ntBASIC3.86□□□□□ -1.79
NOD1Q9Y239 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NOD1Q9Y239 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NOD1Q9Y239 Y_RNA.432-201ENST00000384087 111 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 SNORA72-201ENST00000384339 132 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 MIR218-1-201ENST00000384999 110 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 Y_RNA.584-201ENST00000391090 114 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 RNU6-1328P-201ENST00000410938 106 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 RNU2-55P-201ENST00000411146 174 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.85□□□□□ -1.79
NOD1Q9Y239 AC245047.4-201ENST00000433189 144 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.85□□□□□ -1.79
NOD1Q9Y239 HMGN2P18-201ENST00000450680 270 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.85□□□□□ -1.79
NOD1Q9Y239 IGKV2-26-201ENST00000518305 343 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 AC107934.2-201ENST00000518653 310 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.85□□□□□ -1.79
NOD1Q9Y239 MIR5680-201ENST00000577577 84 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NOD1Q9Y239 MAPK10-322ENST00000641485 4530 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NOD1Q9Y239 MAPK10-253ENST00000641010 4072 ntBASIC3.85□□□□□ -1.79
NOD1Q9Y239 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NOD1Q9Y239 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NOD1Q9Y239 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NOD1Q9Y239 RNU6-834P-201ENST00000362367 110 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 CD24P4-201ENST00000382840 243 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 AC090515.1-201ENST00000465295 476 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.84□□□□□ -1.79
NOD1Q9Y239 RN7SKP179-201ENST00000516126 217 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 RNU2-34P-201ENST00000516534 121 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.84□□□□□ -1.79
NOD1Q9Y239 MIR4276-201ENST00000584832 70 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 AL929325.1-201ENST00000603096 117 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NOD1Q9Y239 MIR7515-201ENST00000637837 67 ntBASIC3.84□□□□□ -1.79
NOD1Q9Y239 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.84□□□□□ -1.8
NOD1Q9Y239 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NOD1Q9Y239 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NOD1Q9Y239 Z83843.1-201ENST00000604070 3685 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 RNU6-1336P-201ENST00000383886 109 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 RNU6-484P-201ENST00000384016 107 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 MICF-203ENST00000432679 129 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 RNU7-107P-201ENST00000459121 61 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.83□□□□□ -1.8
NOD1Q9Y239 RNU6-1299P-201ENST00000516316 100 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 RNU6-579P-201ENST00000516879 102 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 RNA5SP490-201ENST00000517141 136 ntBASIC3.83□□□□□ -1.8
NOD1Q9Y239 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.83□□□□□ -1.8
NOD1Q9Y239 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
NOD1Q9Y239 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NOD1Q9Y239 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NOD1Q9Y239 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
NOD1Q9Y239 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NOD1Q9Y239 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NOD1Q9Y239 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NOD1Q9Y239 DYNLT3P1-201ENST00000378574 347 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.82□□□□□ -1.8
NOD1Q9Y239 RNU6-546P-201ENST00000383991 107 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 RNU6-1056P-201ENST00000383996 107 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 U6atac.2-201ENST00000408644 118 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.82□□□□□ -1.8
NOD1Q9Y239 SCARNA3-201ENST00000517097 143 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.82□□□□□ -1.8
NOD1Q9Y239 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.82□□□□□ -1.8
NOD1Q9Y239 MIR3199-1-201ENST00000582434 88 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 AC110741.2-201ENST00000605278 268 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 AC090115.4-201ENST00000609970 188 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 AL162274.2-201ENST00000614406 332 ntBASIC3.82□□□□□ -1.8
NOD1Q9Y239 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NOD1Q9Y239 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms