Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.144-201ENST00000363521 113 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.149-201ENST00000363558 117 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.152-201ENST00000363578 100 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 RNU6-961P-201ENST00000363893 105 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.276-201ENST00000364732 109 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 SNORD87-201ENST00000364849 89 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SIX4Q9UIU6 MRPL35P1-201ENST00000404272 572 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 RNU6-121P-201ENST00000410525 99 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 CBX3P6-201ENST00000430257 527 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 AC007395.1-201ENST00000451333 677 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
SIX4Q9UIU6 UBL5P3-201ENST00000475112 231 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.17□□□□□ -2.06
SIX4Q9UIU6 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 SNORA40.15-201ENST00000516884 107 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 SNORA48.11-201ENST00000517015 89 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 AC136932.1-201ENST00000574771 208 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 PRR13P7-201ENST00000605538 430 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.17□□□□□ -2.06
SIX4Q9UIU6 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.17□□□□□ -2.06
SIX4Q9UIU6 MIR1248-201ENST00000629190 106 ntBASIC2.17□□□□□ -2.06
SIX4Q9UIU6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.64-201ENST00000362845 102 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.143-201ENST00000363520 106 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.176-201ENST00000363815 109 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.222-201ENST00000364264 102 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNU6-234P-201ENST00000365229 104 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.439-201ENST00000384119 94 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNU2-20P-201ENST00000410425 191 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNU2-63P-201ENST00000410792 194 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNU2-32P-201ENST00000411193 191 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 DYNLT3P2-201ENST00000442517 295 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.16□□□□□ -2.06
SIX4Q9UIU6 UQCRBP2-201ENST00000447827 297 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
SIX4Q9UIU6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.16□□□□□ -2.06
SIX4Q9UIU6 CYP2C59P-201ENST00000457790 269 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 snoU13.15-201ENST00000459407 104 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNU6-408P-201ENST00000515910 100 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNY3P15-201ENST00000516297 97 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 RNU6-344P-201ENST00000516635 111 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 AK6P2-201ENST00000549020 471 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 SNRPGP19-201ENST00000603826 189 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 AL355297.2-201ENST00000604792 129 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.772-201ENST00000606692 102 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 AC130454.1-201ENST00000622948 401 ntBASIC2.16□□□□□ -2.06
SIX4Q9UIU6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SIX4Q9UIU6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
SIX4Q9UIU6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.06
SIX4Q9UIU6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.19-201ENST00000362462 99 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.183-201ENST00000363882 113 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 RNU6-770P-201ENST00000363929 105 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 RNU6-546P-201ENST00000383991 107 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 SNORA67.2-201ENST00000384300 149 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 SNORA80E-201ENST00000384744 137 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 ELOCP21-201ENST00000412558 336 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 PCNPP5-201ENST00000452246 481 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 LINC01399-202ENST00000458450 244 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 RPS23P5-201ENST00000495419 428 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 AC022616.8-201ENST00000533569 253 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 PRELID2P1-201ENST00000552837 301 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 SNORD11B-201ENST00000607707 90 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.07
SIX4Q9UIU6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC131280.1-202ENST00000624067 4211 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RNU6-743P-201ENST00000364151 106 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RNA5SP240-201ENST00000365355 128 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RNU6-196P-201ENST00000384315 107 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RNU6-937P-201ENST00000384325 106 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RNU2-48P-201ENST00000410694 191 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RPL21P38-201ENST00000418090 167 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AL121890.1-201ENST00000435457 205 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC005002.2-201ENST00000438228 269 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AL731563.1-201ENST00000442202 214 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RNU7-14P-201ENST00000459331 62 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 RNU6-625P-201ENST00000459412 107 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC018868.1-201ENST00000491307 315 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms