Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL390729.2-201ENST00000416137 156 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.54□□□□□ -2
COL20A1Q9P218 RAB28P5-201ENST00000427490 651 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 MTND3P2-201ENST00000438452 342 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 RNU7-57P-201ENST00000459540 60 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 AC010655.3-201ENST00000478818 450 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 RNU6-897P-201ENST00000517135 105 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 AK6P2-201ENST00000549020 471 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.54□□□□□ -2
COL20A1Q9P218 RAC1P9-201ENST00000604990 392 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 MIR3674-201ENST00000636576 68 ntBASIC2.54□□□□□ -2
COL20A1Q9P218 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
COL20A1Q9P218 RNU6-626P-201ENST00000363354 107 ntBASIC2.53□□□□□ -2
COL20A1Q9P218 SNORA72.2-201ENST00000365028 127 ntBASIC2.53□□□□□ -2
COL20A1Q9P218 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
COL20A1Q9P218 snoU13.26-201ENST00000459452 105 ntBASIC2.53□□□□□ -2
COL20A1Q9P218 HMGN1P10-201ENST00000474557 553 ntBASIC2.53□□□□□ -2
COL20A1Q9P218 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.53□□□□□ -2
COL20A1Q9P218 RNU6-397P-201ENST00000516226 104 ntBASIC2.53□□□□□ -2
COL20A1Q9P218 AC005176.2-201ENST00000596933 147 ntBASIC2.53□□□□□ -2
COL20A1Q9P218 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
COL20A1Q9P218 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
COL20A1Q9P218 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
COL20A1Q9P218 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
COL20A1Q9P218 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
COL20A1Q9P218 RNU6-961P-201ENST00000363893 105 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 RNU6-20P-201ENST00000384106 107 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 RNU6-1235P-201ENST00000384559 107 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 MIR548B-201ENST00000385247 97 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.52□□□□□ -2.01
COL20A1Q9P218 AL357134.1-201ENST00000445848 426 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.52□□□□□ -2.01
COL20A1Q9P218 RNU6-498P-201ENST00000459468 107 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 IGKV3-31-201ENST00000523109 329 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 MIR3684-201ENST00000579779 74 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.52□□□□□ -2.01
COL20A1Q9P218 MIR6873-201ENST00000622788 63 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 AC130454.1-201ENST00000622948 401 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 snoZ196.1-201ENST00000625269 89 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 LINC02555-201ENST00000563933 1951 ntBASIC2.52□□□□□ -2.01
COL20A1Q9P218 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL20A1Q9P218 RNU6-1309P-201ENST00000363305 108 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 Y_RNA.176-201ENST00000363815 109 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 RNU6-770P-201ENST00000363929 105 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 SNORD63-201ENST00000384262 68 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 MIR29C-201ENST00000385231 88 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 RNU6-1109P-201ENST00000391187 107 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 RPL21P1-201ENST00000399532 476 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 RNU6-130P-201ENST00000411112 103 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.51□□□□□ -2.01
COL20A1Q9P218 AC005002.2-201ENST00000438228 269 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.51□□□□□ -2.01
COL20A1Q9P218 MTCO2P24-201ENST00000515611 426 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 RNY3P15-201ENST00000516297 97 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.51□□□□□ -2.01
COL20A1Q9P218 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.51□□□□□ -2.01
COL20A1Q9P218 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.51□□□□□ -2.01
COL20A1Q9P218 Y_RNA.143-201ENST00000363520 106 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 Y_RNA.149-201ENST00000363558 117 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 RNU6-160P-201ENST00000384591 107 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 MIR1289-2-201ENST00000408360 111 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 MIR1185-2-201ENST00000408687 86 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 AL731563.1-201ENST00000442202 214 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 AC087441.2-201ENST00000529141 262 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.5□□□□□ -2.01
COL20A1Q9P218 AC008269.2-201ENST00000561915 1105 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 MIR376A1-201ENST00000616574 68 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 AC009831.4-201ENST00000620744 325 ntBASIC2.5□□□□□ -2.01
COL20A1Q9P218 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
COL20A1Q9P218 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL20A1Q9P218 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL20A1Q9P218 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL20A1Q9P218 RNU6-1266P-201ENST00000362794 105 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 Y_RNA.214-201ENST00000364201 112 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 RNU6-418P-201ENST00000384035 107 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 Y_RNA.574-201ENST00000384766 95 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 AC008134.1-201ENST00000420943 193 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 MTCYBP9-201ENST00000431021 303 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 MTCO1P44-201ENST00000441935 243 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 RNU6-221P-201ENST00000459541 99 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 AC010531.2-201ENST00000465012 153 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 MTATP8P1-201ENST00000467115 207 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 RNU6-635P-201ENST00000516651 102 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 AC104984.5-201ENST00000586878 94 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 AL109918.3-201ENST00000603072 338 ntBASIC2.49□□□□□ -2.01
COL20A1Q9P218 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.49□□□□□ -2.01
COL20A1Q9P218 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.49□□□□□ -2.01
COL20A1Q9P218 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL20A1Q9P218 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
COL20A1Q9P218 RNU6-713P-201ENST00000384761 107 ntBASIC2.48□□□□□ -2.01
COL20A1Q9P218 RNU6-57P-201ENST00000411348 103 ntBASIC2.48□□□□□ -2.01
COL20A1Q9P218 RPL23AP36-201ENST00000413895 458 ntBASIC2.48□□□□□ -2.01
COL20A1Q9P218 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms