Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.62□□□□□ -1.99
DDX56Q9NY93 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
DDX56Q9NY93 RNU6-961P-201ENST00000363893 105 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 RNU1-96P-201ENST00000364163 162 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 SNORA16B-201ENST00000364674 135 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 Y_RNA.551-201ENST00000384661 102 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 MIR17-201ENST00000385012 84 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 RNA5SP212-201ENST00000391223 107 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 MIR1252-201ENST00000408861 65 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
DDX56Q9NY93 MTND2P23-201ENST00000422990 651 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX56Q9NY93 RPEP5-201ENST00000441137 268 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
DDX56Q9NY93 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX56Q9NY93 GTF3AP2-201ENST00000557014 266 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 AC008737.2-201ENST00000599446 118 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 AL021879.1-201ENST00000611756 288 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 PART1_1.1-201ENST00000611761 217 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 AC010205.1-201ENST00000616668 449 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 AC006435.5-201ENST00000624486 112 ntBASIC2.61□□□□□ -1.99
DDX56Q9NY93 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.61□□□□□ -1.99
DDX56Q9NY93 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
DDX56Q9NY93 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX56Q9NY93 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX56Q9NY93 RNU6-862P-201ENST00000362804 105 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 Y_RNA.153-201ENST00000363615 91 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 AC096920.1-201ENST00000423991 241 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 AC010598.1-201ENST00000510378 103 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 RNU6-397P-201ENST00000516226 104 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 Y_RNA.720-201ENST00000517166 92 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX56Q9NY93 AC121758.2-201ENST00000553271 193 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 AL137100.2-201ENST00000555786 315 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 AC006380.1-201ENST00000603598 186 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX56Q9NY93 MIR338-201ENST00000636369 67 ntBASIC2.6□□□□□ -1.99
DDX56Q9NY93 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
DDX56Q9NY93 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
DDX56Q9NY93 RNA5SP276-201ENST00000362580 94 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 Y_RNA.145-201ENST00000363527 102 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 AL079342.1-201ENST00000401460 267 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 RNU6-130P-201ENST00000411112 103 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 AC063976.3-201ENST00000426849 329 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 AC069257.2-201ENST00000441819 155 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 RPL26P26-201ENST00000480251 434 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.59□□□□□ -1.99
DDX56Q9NY93 AC005176.2-201ENST00000596933 147 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 SDR42E1P4-201ENST00000620894 481 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 U4.3-201ENST00000621047 82 ntBASIC2.59□□□□□ -1.99
DDX56Q9NY93 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
DDX56Q9NY93 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
DDX56Q9NY93 Y_RNA.230-201ENST00000364348 109 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 SNORA63.7-201ENST00000365579 123 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 Y_RNA.380-201ENST00000365663 111 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 RNA5SP181-201ENST00000410246 98 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 Z92545.1-201ENST00000411782 234 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 AC016909.1-201ENST00000415916 166 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 RPL23AP6-201ENST00000446637 472 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 RNA5SP57-201ENST00000459463 123 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 MIR5094-201ENST00000578766 85 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.58□□□□□ -2
DDX56Q9NY93 RAC1P9-201ENST00000604990 392 ntBASIC2.58□□□□□ -2
DDX56Q9NY93 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
DDX56Q9NY93 RNU6-626P-201ENST00000363354 107 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 RNU6-271P-201ENST00000363858 105 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 RNU6-1019P-201ENST00000364424 107 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 Y_RNA.439-201ENST00000384119 94 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 RNU6-417P-201ENST00000384712 107 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AL390729.2-201ENST00000416137 156 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 COTL1P1-201ENST00000422309 375 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 DPH3P2-201ENST00000422618 250 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.57□□□□□ -2
DDX56Q9NY93 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
DDX56Q9NY93 RPL23AP3-201ENST00000453844 468 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 MTATP8P1-201ENST00000467115 207 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.57□□□□□ -2
DDX56Q9NY93 RNVU1-2-201ENST00000516326 135 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AC131281.1-201ENST00000522984 164 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AC024995.1-201ENST00000523014 93 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 MIR5694-201ENST00000581190 76 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AL355297.3-201ENST00000604082 446 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.57□□□□□ -2
DDX56Q9NY93 MIR6840-201ENST00000611937 71 ntBASIC2.57□□□□□ -2
DDX56Q9NY93 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
DDX56Q9NY93 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.57□□□□□ -2
DDX56Q9NY93 Y_RNA.210-201ENST00000364161 110 ntBASIC2.56□□□□□ -2
DDX56Q9NY93 RNU6-20P-201ENST00000384106 107 ntBASIC2.56□□□□□ -2
DDX56Q9NY93 Y_RNA.459-201ENST00000384251 102 ntBASIC2.56□□□□□ -2
DDX56Q9NY93 MIR23A-201ENST00000385245 73 ntBASIC2.56□□□□□ -2
DDX56Q9NY93 RNA5SP323-201ENST00000391094 133 ntBASIC2.56□□□□□ -2
DDX56Q9NY93 RNU11-5P-201ENST00000391216 129 ntBASIC2.56□□□□□ -2
DDX56Q9NY93 AL117342.1-201ENST00000404861 406 ntBASIC2.56□□□□□ -2
DDX56Q9NY93 RNU2-20P-201ENST00000410425 191 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms