Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU1-73P-201ENST00000383971 164 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 RNU6-768P-201ENST00000384683 107 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 MT-TT-201ENST00000387460 66 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 RNA5SP475-201ENST00000410568 110 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 RNA5SP217-201ENST00000515959 91 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 RNU2-56P-201ENST00000516826 190 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 AC023043.3-201ENST00000593113 385 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 AP001340.1-201ENST00000624405 217 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ATG3Q9NT62 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG3Q9NT62 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 Y_RNA.251-201ENST00000364551 99 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 RNU6-1180P-201ENST00000364935 107 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 RNU6-969P-201ENST00000383900 105 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 SNORA22-201ENST00000383907 134 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 RNU6-147P-201ENST00000383983 107 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 MIR616-201ENST00000385293 97 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 AL139095.1-201ENST00000404326 391 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 AL714022.1-201ENST00000439897 151 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 RNU6-589P-201ENST00000516485 107 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 AC024614.2-201ENST00000577584 372 ntBASIC3.79□□□□□ -1.8
ATG3Q9NT62 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATG3Q9NT62 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
ATG3Q9NT62 Y_RNA.287-201ENST00000364853 94 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 Y_RNA.294-201ENST00000364916 102 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 Y_RNA.415-201ENST00000384012 112 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 SNORA72.4-201ENST00000384174 132 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 RNU6-588P-201ENST00000410281 105 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 CYCSP49-201ENST00000420810 319 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 AC063976.3-201ENST00000426849 329 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 AC087499.2-201ENST00000432861 149 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 AL121914.1-201ENST00000450188 156 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 Y_RNA.712-201ENST00000517011 92 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 AP001328.1-201ENST00000528550 176 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG3Q9NT62 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG3Q9NT62 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.78□□□□□ -1.8
ATG3Q9NT62 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG3Q9NT62 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.77□□□□□ -1.81
ATG3Q9NT62 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG3Q9NT62 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 RNA5SP383-201ENST00000362934 120 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 RNU5F-3P-201ENST00000363767 117 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 RNU6-884P-201ENST00000363889 107 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 RNU6-643P-201ENST00000384018 107 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 RNU6-245P-201ENST00000384020 107 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.77□□□□□ -1.81
ATG3Q9NT62 AL158823.1-201ENST00000418441 478 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG3Q9NT62 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG3Q9NT62 RPL39P29-201ENST00000447779 157 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 AC090525.1-201ENST00000479116 478 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 RNU6-581P-201ENST00000516214 105 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 AC006380.1-201ENST00000603598 186 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.77□□□□□ -1.81
ATG3Q9NT62 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG3Q9NT62 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG3Q9NT62 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
ATG3Q9NT62 RNU1-62P-201ENST00000362599 164 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 SNORD115-30-201ENST00000364117 82 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ATG3Q9NT62 AL031003.1-201ENST00000404229 172 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 RPL32P35-201ENST00000415214 394 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 AC245291.1-201ENST00000419501 328 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 AC019205.3-201ENST00000424573 156 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.76□□□□□ -1.81
ATG3Q9NT62 SNORA64.4-201ENST00000516632 81 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 CKS1BP7-201ENST00000522230 235 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG3Q9NT62 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG3Q9NT62 U7.2-201ENST00000607576 63 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG3Q9NT62 MIR6844-201ENST00000637122 62 ntBASIC3.76□□□□□ -1.81
ATG3Q9NT62 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG3Q9NT62 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATG3Q9NT62 RNU6-235P-201ENST00000362644 107 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 MIR15B-201ENST00000385045 98 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 AL355497.1-201ENST00000406262 551 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 RNA5SP89-201ENST00000410300 108 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
ATG3Q9NT62 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG3Q9NT62 SNORD109B-201ENST00000458961 67 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 SNORD109A-201ENST00000459128 67 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 AC103975.1-201ENST00000482506 483 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 SNORA31.21-201ENST00000517180 77 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 AC115990.1-201ENST00000526957 301 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG3Q9NT62 MTND5P34-201ENST00000568888 325 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 MAPK10-362ENST00000641864 4484 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 ADAM3A-203ENST00000461344 2157 ntBASIC3.75□□□□□ -1.81
ATG3Q9NT62 AP003122.5-201ENST00000527668 3766 ntBASIC3.74□□□□□ -1.81
ATG3Q9NT62 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG3Q9NT62 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG3Q9NT62 SNORD56.3-201ENST00000363507 71 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms