Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC011406.1-201ENST00000512440 370 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 RNU6-277P-201ENST00000516272 106 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 RNA5SP54-201ENST00000516951 92 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 MIR4273-201ENST00000582824 84 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 AC069114.2-201ENST00000604699 304 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.56□□□□□ -2.16
HPS4Q9NQG7 MTND4P12-201ENST00000498999 1377 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 MIR424-201ENST00000362227 98 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.2-201ENST00000362330 96 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.70-201ENST00000362886 110 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 SNORA7.1-201ENST00000363750 139 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 SNORD115-32-201ENST00000364079 82 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 RNU1-96P-201ENST00000364163 162 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 RNU6-593P-201ENST00000364716 112 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 RNU6-596P-201ENST00000365395 98 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 SNORA67.2-201ENST00000384300 149 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 RNU6-331P-201ENST00000384724 107 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 MIR520A-201ENST00000384862 85 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 MIR586-201ENST00000385035 97 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HPS4Q9NQG7 MTND4LP11-201ENST00000422184 280 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AL445305.1-201ENST00000432577 575 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AC245047.4-201ENST00000433189 144 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.55□□□□□ -2.16
HPS4Q9NQG7 MTND5P20-201ENST00000448677 143 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.55□□□□□ -2.16
HPS4Q9NQG7 snoU13.30-201ENST00000458951 104 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.635-201ENST00000459041 101 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.702-201ENST00000516843 96 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.708-201ENST00000516950 96 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.55□□□□□ -2.16
HPS4Q9NQG7 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AC005014.2-201ENST00000607795 599 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AL132765.2-201ENST00000610812 351 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AC104260.1-201ENST00000616660 539 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AC126177.8-201ENST00000618339 1015 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AC099654.5-201ENST00000636479 350 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 AL669831.3-213ENST00000636676 183 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
HPS4Q9NQG7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AC010615.1-201ENST00000594254 1764 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 SNORD115-8-201ENST00000363856 82 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 RNU6-392P-201ENST00000364926 101 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 SNORD115-38-201ENST00000365037 82 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.529-201ENST00000384586 119 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 SNORA75.4-201ENST00000391278 119 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AL353997.1-201ENST00000432936 108 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 RNU6-120P-201ENST00000516077 103 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 RNU6-344P-201ENST00000516635 111 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 RNU6-58P-201ENST00000517143 103 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AC134698.4-201ENST00000523451 826 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AC084364.2-201ENST00000546924 395 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 AL353149.1-201ENST00000610667 244 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.804-201ENST00000615262 101 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 MIR338-201ENST00000636369 67 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 MIR1302-1-201ENST00000637932 143 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 ZNF299P-201ENST00000406845 1804 ntBASIC1.54□□□□□ -2.16
HPS4Q9NQG7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HPS4Q9NQG7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.16
HPS4Q9NQG7 RNU6-595P-201ENST00000363944 107 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 RNU6-245P-201ENST00000384020 107 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 MIR153-2-201ENST00000385225 87 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.53□□□□□ -2.16
HPS4Q9NQG7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.53□□□□□ -2.16
HPS4Q9NQG7 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.53□□□□□ -2.16
HPS4Q9NQG7 HSPE1P9-201ENST00000440046 311 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 RNU7-57P-201ENST00000459540 60 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 AC005908.1-201ENST00000468701 347 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 AC025465.3-201ENST00000510570 311 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 RNU6-559P-201ENST00000516151 98 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 SCARNA16.2-201ENST00000516520 172 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 RNU6-1198P-201ENST00000516904 67 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 APOOP3-201ENST00000536787 586 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 AC093027.1-201ENST00000546698 429 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 AC113139.1-201ENST00000605049 239 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 MTND4LP32-201ENST00000636111 270 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 AC112487.2-201ENST00000637950 304 ntBASIC1.53□□□□□ -2.16
HPS4Q9NQG7 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
HPS4Q9NQG7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms