Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 U8.18-201ENST00000459285 133 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC012531.5-201ENST00000611375 151 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC096577.2-201ENST00000611455 153 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSU72Q9NP77 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 MIR6830-201ENST00000636015 70 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSU72Q9NP77 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSU72Q9NP77 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SSU72Q9NP77 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSU72Q9NP77 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSU72Q9NP77 RNU1-70P-201ENST00000362618 164 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 RNU1-105P-201ENST00000363470 161 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 Y_RNA.280-201ENST00000364765 112 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 RNU6-1056P-201ENST00000383996 107 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 UQCRHP3-201ENST00000451503 251 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 RAC1P5-201ENST00000512182 576 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 RNA5SP112-201ENST00000515937 99 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 RNU6-197P-201ENST00000516680 100 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 AC018630.3-201ENST00000542637 96 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 AL929325.1-201ENST00000603096 117 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 U3.45-201ENST00000607547 219 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 MIR1248-201ENST00000629190 106 ntBASIC3.28□□□□□ -1.88
SSU72Q9NP77 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
SSU72Q9NP77 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
SSU72Q9NP77 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.88
SSU72Q9NP77 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.27□□□□□ -1.89
SSU72Q9NP77 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.27□□□□□ -1.89
SSU72Q9NP77 AC007256.1-201ENST00000392253 2765 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSU72Q9NP77 RNU6-235P-201ENST00000362644 107 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 RNU4-41P-201ENST00000364426 143 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 RNU6-1064P-201ENST00000410626 104 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.27□□□□□ -1.89
SSU72Q9NP77 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.27□□□□□ -1.89
SSU72Q9NP77 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.27□□□□□ -1.89
SSU72Q9NP77 MRPS36P2-201ENST00000512569 299 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 MIR5685-201ENST00000579080 79 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.27□□□□□ -1.89
SSU72Q9NP77 AL049861.1-201ENST00000603130 150 ntBASIC3.27□□□□□ -1.89
SSU72Q9NP77 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSU72Q9NP77 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSU72Q9NP77 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSU72Q9NP77 SNORA63.4-201ENST00000362763 126 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSU72Q9NP77 Y_RNA.584-201ENST00000391090 114 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 RNU2-55P-201ENST00000411146 174 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 RPL30P4-201ENST00000429309 333 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.26□□□□□ -1.89
SSU72Q9NP77 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 SSXP5-201ENST00000443473 287 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 AC245102.2-201ENST00000448956 180 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 RN7SL385P-201ENST00000468873 276 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 PDCD5P2-201ENST00000507570 312 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 RNU6-948P-201ENST00000516374 107 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 AC090049.2-201ENST00000550377 109 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 AL160236.1-201ENST00000556317 195 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.26□□□□□ -1.89
SSU72Q9NP77 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.26□□□□□ -1.89
SSU72Q9NP77 AC090115.4-201ENST00000609970 188 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 MIR6129-201ENST00000616087 109 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 AC110079.1-202ENST00000635213 138 ntBASIC3.26□□□□□ -1.89
SSU72Q9NP77 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SSU72Q9NP77 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSU72Q9NP77 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SSU72Q9NP77 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSU72Q9NP77 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSU72Q9NP77 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.25□□□□□ -1.89
SSU72Q9NP77 U8.1-201ENST00000362843 134 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 RNU6-486P-201ENST00000363116 107 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 SNORA25.7-201ENST00000364375 127 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 RNU6-1083P-201ENST00000384022 107 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 RNU6-1235P-201ENST00000384559 107 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 RNU6-136P-201ENST00000384663 107 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 SNORA40.5-201ENST00000391061 128 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 RN7SKP202-201ENST00000410439 330 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 AC245047.4-201ENST00000433189 144 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 RPS12P18-201ENST00000442381 270 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.25□□□□□ -1.89
SSU72Q9NP77 RNU6-498P-201ENST00000459468 107 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 RN7SKP179-201ENST00000516126 217 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.25□□□□□ -1.89
SSU72Q9NP77 MIR4697-201ENST00000582977 78 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 MIR3117-201ENST00000584034 78 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 MIR378J-201ENST00000611988 109 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 AC006435.5-201ENST00000624486 112 ntBASIC3.25□□□□□ -1.89
SSU72Q9NP77 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SSU72Q9NP77 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSU72Q9NP77 Y_RNA.432-201ENST00000384087 111 ntBASIC3.24□□□□□ -1.89
SSU72Q9NP77 RNU6-1144P-201ENST00000384247 104 ntBASIC3.24□□□□□ -1.89
SSU72Q9NP77 SNORA72-201ENST00000384339 132 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms