Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 TRBVB-201ENST00000477100 408 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 ATP5EP1-201ENST00000510257 156 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 RNU6-966P-201ENST00000516479 104 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.5□□□□□ -2.01
USP29Q9HBJ7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.5□□□□□ -2.01
USP29Q9HBJ7 PRELID2P1-201ENST00000552837 301 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 AC006006.1-201ENST00000603082 144 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 AC062037.2-201ENST00000610137 73 ntBASIC2.5□□□□□ -2.01
USP29Q9HBJ7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP29Q9HBJ7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.286-201ENST00000364813 102 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.498-201ENST00000384460 102 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.541-201ENST00000384640 113 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 MT-TG-201ENST00000387429 68 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 RNU5A-5P-201ENST00000411054 116 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.49□□□□□ -2.01
USP29Q9HBJ7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.49□□□□□ -2.01
USP29Q9HBJ7 MIR3671-201ENST00000580455 88 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC127459.3-201ENST00000624328 466 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 MIR1248-201ENST00000629190 106 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC010615.1-201ENST00000594254 1764 ntBASIC2.49□□□□□ -2.01
USP29Q9HBJ7 AC080100.1-201ENST00000624239 5356 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.288-201ENST00000364854 92 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 MIR586-201ENST00000385035 97 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AL359511.1-201ENST00000402970 211 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 RNU2-63P-201ENST00000410792 194 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 SUMO1P4-201ENST00000429430 302 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AL356320.1-201ENST00000429616 163 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 RNU1-117P-201ENST00000517041 158 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AC022616.8-201ENST00000533569 253 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AC005176.2-201ENST00000596933 147 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AC022441.3-201ENST00000605737 136 ntBASIC2.48□□□□□ -2.01
USP29Q9HBJ7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.48□□□□□ -2.01
USP29Q9HBJ7 RNU6-545P-201ENST00000362681 104 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 SNORD81.1-201ENST00000363064 77 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNA5SP393-201ENST00000363423 117 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNA5SP125-201ENST00000364843 120 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU6-1175P-201ENST00000365200 107 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU6-546P-201ENST00000383991 107 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.562-201ENST00000384695 113 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU6-443P-201ENST00000384780 107 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 MIR548B-201ENST00000385247 97 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU4-30P-201ENST00000410245 143 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNA5SP425-201ENST00000410336 112 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.602-201ENST00000410535 92 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU4-53P-201ENST00000410828 140 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU2-38P-201ENST00000410856 79 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU2-32P-201ENST00000411193 191 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.47□□□□□ -2.01
USP29Q9HBJ7 AC139712.2-201ENST00000424302 339 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.47□□□□□ -2.01
USP29Q9HBJ7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 HMGN2P9-201ENST00000476875 229 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 AC018868.1-201ENST00000491307 315 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
USP29Q9HBJ7 MTND1P19-201ENST00000511780 315 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNA5SP82-201ENST00000516707 92 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 RNU6-965P-201ENST00000516721 96 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.47□□□□□ -2.01
USP29Q9HBJ7 U4atac.1-201ENST00000618345 95 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 AC091932.3-201ENST00000624223 323 ntBASIC2.47□□□□□ -2.01
USP29Q9HBJ7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
USP29Q9HBJ7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USP29Q9HBJ7 Y_RNA.16-201ENST00000362421 102 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 RNU6-454P-201ENST00000364292 107 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.307-201ENST00000365022 117 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 SNORA3.2-201ENST00000408221 125 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.618-201ENST00000410949 107 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.46□□□□□ -2.02
USP29Q9HBJ7 AL390729.2-201ENST00000416137 156 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 AC096920.1-201ENST00000423991 241 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 RNU6-1132P-201ENST00000459214 107 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 RNU7-14P-201ENST00000459331 62 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.46□□□□□ -2.02
USP29Q9HBJ7 SEPT14P8-201ENST00000508026 178 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.680-201ENST00000516441 93 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms