Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.09□□□□□ -1.91
CCDC113Q9H0I3 GTF3AP2-201ENST00000557014 266 ntBASIC3.09□□□□□ -1.91
CCDC113Q9H0I3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC113Q9H0I3 AC090425.1-201ENST00000610007 140 ntBASIC3.09□□□□□ -1.91
CCDC113Q9H0I3 U6.115-201ENST00000636045 103 ntBASIC3.09□□□□□ -1.91
CCDC113Q9H0I3 AC009487.4-201ENST00000624969 3585 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.243-201ENST00000364481 109 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 RNU1-91P-201ENST00000364746 163 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 MIR512-1-201ENST00000384913 84 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 MIR634-201ENST00000385208 97 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 AL603910.2-201ENST00000407268 136 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 SUMO1P2-201ENST00000452524 304 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 RNA5SP356-201ENST00000515972 94 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 RNU6-436P-201ENST00000516171 114 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 ELOCP29-201ENST00000588193 334 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 AC090115.4-201ENST00000609970 188 ntBASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC113Q9H0I3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.60-201ENST00000362831 98 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.136-201ENST00000363444 102 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 AL031003.1-201ENST00000404229 172 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 AC087499.2-201ENST00000432861 149 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 RNU6-388P-201ENST00000517012 105 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 RNU6-389P-201ENST00000517048 105 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 NDUFA5P6-201ENST00000542110 379 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 AC026271.5-201ENST00000577873 130 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 MIR3145-201ENST00000580727 82 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 AC005357.1-201ENST00000588399 301 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 DEFB117-201ENST00000602356 141 ntBASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC113Q9H0I3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 SNORD115-30-201ENST00000364117 82 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 RNU1-112P-201ENST00000364401 164 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.277-201ENST00000364754 102 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 RNU6-847P-201ENST00000411115 108 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AL451074.5-201ENST00000415894 435 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 MTCO1P5-201ENST00000433573 344 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AL357134.1-201ENST00000445848 426 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AC245102.2-201ENST00000448956 180 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AC010531.2-201ENST00000465012 153 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AC003982.1-202ENST00000469928 248 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 SNORA70.12-201ENST00000516084 153 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.680-201ENST00000516441 93 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 MIR3126-201ENST00000577443 74 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 AC010900.2-201ENST00000604508 210 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 BX284668.6-201ENST00000606899 438 ntBASIC3.06□□□□□ -1.92
CCDC113Q9H0I3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 RNU4-80P-201ENST00000363200 141 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 RNU6-1240P-201ENST00000365155 104 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.552-201ENST00000384665 112 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 AL138827.1-201ENST00000402666 306 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 SNORD88.1-201ENST00000408684 91 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 RNU6-710P-201ENST00000410424 105 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 EDDM3CP-201ENST00000415977 425 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 RPL21P9-201ENST00000556149 474 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 U2.14-201ENST00000615943 113 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 MIR6733-201ENST00000635723 61 ntBASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC113Q9H0I3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.65-201ENST00000362846 100 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 MIR1253-201ENST00000408273 105 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 MTCO1P44-201ENST00000441935 243 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 AC091959.1-201ENST00000495857 238 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 AC010598.1-201ENST00000510378 103 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 MTND1P19-201ENST00000511780 315 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 AC025647.1-201ENST00000517879 253 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 AC027419.1-201ENST00000522976 328 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 CYCSP26-201ENST00000534107 320 ntBASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC113Q9H0I3 AC062016.1-201ENST00000355719 319 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 Y_RNA.99-201ENST00000363138 105 ntBASIC3.03□□□□□ -1.92
CCDC113Q9H0I3 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms