Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SNORA80A-201ENST00000363922 136 ntBASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 AC109925.1-201ENST00000478069 331 ntBASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 MIR4513-201ENST00000581077 86 ntBASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 AL512605.2-201ENST00000592972 256 ntBASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TRIM55Q9BYV6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 UBE2WP1-201ENST00000362030 340 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 Y_RNA.275-201ENST00000364726 110 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 RNU6-1240P-201ENST00000365155 104 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 RNU2-61P-201ENST00000411069 191 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 AC024067.1-201ENST00000426199 223 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 AL121890.1-201ENST00000435457 205 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 AC010598.1-201ENST00000510378 103 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 SNORA27.4-201ENST00000516650 95 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 RNU6-111P-201ENST00000517179 105 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 RNU6-794P-201ENST00000517261 64 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 AC026271.5-201ENST00000577873 130 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 AL033523.1-201ENST00000605153 153 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 BX284668.6-201ENST00000606899 438 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM55Q9BYV6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 Y_RNA.124-201ENST00000363339 93 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 RNU6-740P-201ENST00000364734 105 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 RNU1-91P-201ENST00000364746 163 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 MIR873-201ENST00000401120 77 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 SNORD88.1-201ENST00000408684 91 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 RNU6-847P-201ENST00000411115 108 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 RN7SL863P-201ENST00000462370 296 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 RN7SL20P-201ENST00000488827 297 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 SNORA70.12-201ENST00000516084 153 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 AC027419.1-201ENST00000522976 328 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 MIR4643-201ENST00000577473 78 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 AC022202.1-201ENST00000613515 211 ntBASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM55Q9BYV6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 SNORD114-7-201ENST00000362520 77 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 SNORA27.1-201ENST00000362604 124 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 SNORD114-6-201ENST00000364393 72 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 SNORA44-201ENST00000384584 132 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 RNU6-160P-201ENST00000384591 107 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 RNU6-1248P-201ENST00000391096 64 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 RN7SKP284-201ENST00000411002 343 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 AL451074.5-201ENST00000415894 435 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 AC060773.1-201ENST00000421698 310 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 RPL39P40-201ENST00000445481 146 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 RPL23AP7-203ENST00000449021 469 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 AL139109.1-201ENST00000455491 297 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 AC022080.3-201ENST00000544433 482 ntBASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRIM55Q9BYV6 AL159152.1-201ENST00000635019 2587 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 RNU6-271P-201ENST00000363858 105 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 RNU6-338P-201ENST00000383888 105 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 RNU6-662P-201ENST00000384253 104 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.552-201ENST00000384665 112 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 MIR181B1-201ENST00000385240 110 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 SNORD58.1-201ENST00000391313 66 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 RNU6-710P-201ENST00000410424 105 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 MIR3126-201ENST00000577443 74 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 AL162424.1-201ENST00000602325 221 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.65-201ENST00000362846 100 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.117-201ENST00000363294 101 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.217-201ENST00000364214 105 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.257-201ENST00000364596 102 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 AC245102.2-201ENST00000448956 180 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 RNU1-131P-201ENST00000458943 161 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 Y_RNA.641-201ENST00000459414 105 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.15-201ENST00000611544 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.16-201ENST00000613119 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.12-201ENST00000613778 191 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.20-201ENST00000613956 192 ntBASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
TRIM55Q9BYV6 U2.9-201ENST00000615427 191 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms