Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AP002001.1-203ENST00000534002 267 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AC055872.1-201ENST00000570978 278 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 MIR3684-201ENST00000579779 74 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 MIR4503-201ENST00000582187 83 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 MIR3149-201ENST00000584629 83 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AP000942.4-201ENST00000604811 241 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AC006386.2-201ENST00000624491 75 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 AC012005.1-201ENST00000624575 75 ntBASIC2.53□□□□□ -2
TRIM54Q9BYV2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
TRIM54Q9BYV2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.53□□□□□ -2
TRIM54Q9BYV2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.446-201ENST00000384178 104 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.581-201ENST00000391017 97 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 RNU2-54P-201ENST00000410299 190 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 AC008134.1-201ENST00000420943 193 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 AC139712.2-201ENST00000424302 339 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 AC063976.3-201ENST00000426849 329 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 AL357134.1-201ENST00000445848 426 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 RNU6-221P-201ENST00000459541 99 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 AC010531.2-201ENST00000465012 153 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 TRBVB-201ENST00000477100 408 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 RNU6-155P-201ENST00000516347 100 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 EIF4BP1-201ENST00000554881 351 ntBASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRIM54Q9BYV2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 SNORD81.1-201ENST00000363064 77 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.101-201ENST00000363154 102 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 RNU6-702P-201ENST00000364982 107 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.376-201ENST00000365638 108 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 RNU6-574P-201ENST00000384265 107 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 SNORD14D-201ENST00000384390 87 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 RN7SL429P-201ENST00000479090 223 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 RN7SL489P-201ENST00000486185 223 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 RN7SL327P-201ENST00000488659 223 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 AC004817.2-201ENST00000561794 651 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 RN7SL853P-201ENST00000617250 223 ntBASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM54Q9BYV2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.84-201ENST00000363011 104 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 snoU2_19.2-201ENST00000363024 80 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 RNU6-454P-201ENST00000364292 107 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.288-201ENST00000364854 92 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 RNU1-138P-201ENST00000384093 164 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 RNU1-148P-201ENST00000384472 162 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 RNU6-160P-201ENST00000384591 107 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 MIR196B-201ENST00000384852 84 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 MIR215-201ENST00000384858 110 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 AC009963.1-201ENST00000417265 157 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 MTCO1P44-201ENST00000441935 243 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 AC025750.2-201ENST00000442609 450 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 RN7SKP132-201ENST00000516001 208 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 RNU6-496P-201ENST00000516145 99 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 AC037487.3-201ENST00000606668 112 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM54Q9BYV2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 RNU6-290P-201ENST00000365212 101 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.396-201ENST00000383949 103 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 RNU6-102P-201ENST00000384485 104 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 SNORA53-201ENST00000391141 249 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 MIR1262-201ENST00000408276 93 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 AC007064.1-201ENST00000412238 351 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 POLR2KP2-201ENST00000438155 177 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 SUMO1P2-201ENST00000452524 304 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 HSPE1P25-201ENST00000455484 251 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 HMGB3P17-201ENST00000504195 649 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 AC107222.1-201ENST00000510899 637 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 RNU2-12P-201ENST00000517216 168 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 AC104984.5-201ENST00000586878 94 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 AL590240.4-201ENST00000616908 390 ntBASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
TRIM54Q9BYV2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM54Q9BYV2 RNU6-324P-201ENST00000363957 106 ntBASIC2.48□□□□□ -2.01
TRIM54Q9BYV2 Y_RNA.193-201ENST00000363979 102 ntBASIC2.48□□□□□ -2.01
TRIM54Q9BYV2 RNU6-301P-201ENST00000384277 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms