Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 AC233702.2-202ENST00000562547 291 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 MIR3171-201ENST00000584270 74 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 MZT1P2-201ENST00000604387 248 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 SNORD14A-201ENST00000606526 91 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 LINC02555-201ENST00000563933 1951 ntBASIC2.23□□□□□ -2.05
CLSTN3Q9BQT9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 AC005592.1-201ENST00000566527 1640 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 RNU6-727P-201ENST00000363592 107 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 RNY3P11-201ENST00000364153 102 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 Y_RNA.216-201ENST00000364205 93 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 SNORD12B-201ENST00000410433 91 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 AC011753.1-201ENST00000451001 220 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 RNU6-498P-201ENST00000459468 107 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 RNU7-57P-201ENST00000459540 60 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 HMGN2P9-201ENST00000476875 229 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 AL163540.1-201ENST00000485382 386 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 Y_RNA.711-201ENST00000516993 102 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 Y_RNA.713-201ENST00000517013 96 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 MIR5188-201ENST00000583467 113 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLSTN3Q9BQT9 RNU4-50P-201ENST00000364361 141 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 SNORD14.1-201ENST00000365609 90 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-1310P-201ENST00000384153 107 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-318P-201ENST00000384283 103 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.498-201ENST00000384460 102 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 AC096644.2-201ENST00000429278 159 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 HMGN2P23-201ENST00000456759 269 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 MIR3684-201ENST00000579779 74 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 AC007485.1-201ENST00000616755 206 ntBASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLSTN3Q9BQT9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 RNA5SP361-201ENST00000362686 118 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 RNA5SP465-201ENST00000391195 109 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 AL139156.1-201ENST00000412785 841 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 SDAD1P3-201ENST00000427380 333 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 TOMM22P2-201ENST00000430735 237 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 MTCO1P44-201ENST00000441935 243 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 CHEK2P4-201ENST00000450340 246 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-107P-201ENST00000516643 102 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.2□□□□□ -2.06
CLSTN3Q9BQT9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 RNU1-58P-201ENST00000362413 163 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 SNORA63-201ENST00000363450 132 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.148-201ENST00000363557 117 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 SNORA63.7-201ENST00000365579 123 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 SNORA22B-201ENST00000383876 138 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AC008134.1-201ENST00000420943 193 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AC139712.2-201ENST00000424302 339 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AC112492.4-201ENST00000456549 352 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AC090255.1-201ENST00000495779 349 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 SNORA40.9-201ENST00000515895 93 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AC018448.1-201ENST00000552843 316 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AC009127.3-201ENST00000570531 403 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AL390123.1-201ENST00000603216 237 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 SNORD58B-201ENST00000607313 66 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 snoZ196.1-201ENST00000625269 89 ntBASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLSTN3Q9BQT9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 ZNF355P-201ENST00000427301 3216 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 SNORD115-3-201ENST00000363100 82 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-23P-201ENST00000363283 107 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 SNORA3A-201ENST00000364113 130 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 SNORD87-201ENST00000364849 89 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 MIR518A2-201ENST00000384966 87 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 MRPL42P3-201ENST00000401492 326 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 MRPL35P1-201ENST00000404272 572 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 MIR1185-2-201ENST00000408687 86 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms