Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
SMOQ99835 RNU2-12P-201ENST00000517216 168 ntBASIC2.66□□□□□ -1.98
SMOQ99835 MIR3145-201ENST00000580727 82 ntBASIC2.66□□□□□ -1.98
SMOQ99835 AC090616.3-201ENST00000582184 217 ntBASIC2.66□□□□□ -1.98
SMOQ99835 AC141273.2-201ENST00000618989 130 ntBASIC2.66□□□□□ -1.98
SMOQ99835 MIR5739-201ENST00000619803 80 ntBASIC2.66□□□□□ -1.98
SMOQ99835 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
SMOQ99835 MIR1248-201ENST00000629190 106 ntBASIC2.66□□□□□ -1.98
SMOQ99835 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.66□□□□□ -1.98
SMOQ99835 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.66□□□□□ -1.98
SMOQ99835 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMOQ99835 RNU1-23P-201ENST00000363361 144 ntBASIC2.65□□□□□ -1.99
SMOQ99835 MIR586-201ENST00000385035 97 ntBASIC2.65□□□□□ -1.99
SMOQ99835 MTCO1P5-201ENST00000433573 344 ntBASIC2.65□□□□□ -1.99
SMOQ99835 AL161788.1-201ENST00000441805 169 ntBASIC2.65□□□□□ -1.99
SMOQ99835 AC109329.2-201ENST00000519658 482 ntBASIC2.65□□□□□ -1.99
SMOQ99835 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.65□□□□□ -1.99
SMOQ99835 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.65□□□□□ -1.99
SMOQ99835 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.65□□□□□ -1.99
SMOQ99835 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMOQ99835 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SMOQ99835 RNU4-82P-201ENST00000362443 140 ntBASIC2.64□□□□□ -1.99
SMOQ99835 Y_RNA.65-201ENST00000362846 100 ntBASIC2.64□□□□□ -1.99
SMOQ99835 Y_RNA.136-201ENST00000363444 102 ntBASIC2.64□□□□□ -1.99
SMOQ99835 U3.8-201ENST00000363675 217 ntBASIC2.64□□□□□ -1.99
SMOQ99835 SNORA67.4-201ENST00000384688 142 ntBASIC2.64□□□□□ -1.99
SMOQ99835 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMOQ99835 RNU2-14P-201ENST00000411053 191 ntBASIC2.64□□□□□ -1.99
SMOQ99835 RNU2-32P-201ENST00000411193 191 ntBASIC2.64□□□□□ -1.99
SMOQ99835 AL513477.1-202ENST00000417061 214 ntBASIC2.64□□□□□ -1.99
SMOQ99835 OOSP1P1-201ENST00000423265 274 ntBASIC2.64□□□□□ -1.99
SMOQ99835 RPL21P9-201ENST00000556149 474 ntBASIC2.64□□□□□ -1.99
SMOQ99835 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.64□□□□□ -1.99
SMOQ99835 U4.3-201ENST00000621047 82 ntBASIC2.64□□□□□ -1.99
SMOQ99835 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.64□□□□□ -1.99
SMOQ99835 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.64□□□□□ -1.99
SMOQ99835 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMOQ99835 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.63□□□□□ -1.99
SMOQ99835 SNORA25.1-201ENST00000362326 128 ntBASIC2.63□□□□□ -1.99
SMOQ99835 Y_RNA.44-201ENST00000362676 108 ntBASIC2.63□□□□□ -1.99
SMOQ99835 MT-TR-201ENST00000387439 65 ntBASIC2.63□□□□□ -1.99
SMOQ99835 SNORD58.1-201ENST00000391313 66 ntBASIC2.63□□□□□ -1.99
SMOQ99835 MIR1283-1-201ENST00000408494 87 ntBASIC2.63□□□□□ -1.99
SMOQ99835 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.63□□□□□ -1.99
SMOQ99835 TOMM22P2-201ENST00000430735 237 ntBASIC2.63□□□□□ -1.99
SMOQ99835 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
SMOQ99835 AL513328.1-201ENST00000446460 224 ntBASIC2.63□□□□□ -1.99
SMOQ99835 NDUFB4P10-201ENST00000452541 359 ntBASIC2.63□□□□□ -1.99
SMOQ99835 AC091959.1-201ENST00000495857 238 ntBASIC2.63□□□□□ -1.99
SMOQ99835 CKS1BP2-201ENST00000497342 240 ntBASIC2.63□□□□□ -1.99
SMOQ99835 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.63□□□□□ -1.99
SMOQ99835 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.63□□□□□ -1.99
SMOQ99835 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.63□□□□□ -1.99
SMOQ99835 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SMOQ99835 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
SMOQ99835 AC037487.3-201ENST00000606668 112 ntBASIC2.63□□□□□ -1.99
SMOQ99835 BX284668.6-201ENST00000606899 438 ntBASIC2.63□□□□□ -1.99
SMOQ99835 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SMOQ99835 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
SMOQ99835 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SMOQ99835 RNA5SP456-201ENST00000364002 114 ntBASIC2.62□□□□□ -1.99
SMOQ99835 Y_RNA.269-201ENST00000364685 89 ntBASIC2.62□□□□□ -1.99
SMOQ99835 RNU6-546P-201ENST00000383991 107 ntBASIC2.62□□□□□ -1.99
SMOQ99835 AL139095.1-201ENST00000404326 391 ntBASIC2.62□□□□□ -1.99
SMOQ99835 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
SMOQ99835 AC022616.8-201ENST00000533569 253 ntBASIC2.62□□□□□ -1.99
SMOQ99835 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
SMOQ99835 DEFB117-201ENST00000602356 141 ntBASIC2.62□□□□□ -1.99
SMOQ99835 AL356280.1-201ENST00000603614 379 ntBASIC2.62□□□□□ -1.99
SMOQ99835 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.62□□□□□ -1.99
SMOQ99835 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.62□□□□□ -1.99
SMOQ99835 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMOQ99835 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.62□□□□□ -1.99
SMOQ99835 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMOQ99835 Z82209.1-201ENST00000422141 2135 ntBASIC2.62□□□□□ -1.99
SMOQ99835 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.61□□□□□ -1.99
SMOQ99835 RNU4-80P-201ENST00000363200 141 ntBASIC2.61□□□□□ -1.99
SMOQ99835 RNU6-740P-201ENST00000364734 105 ntBASIC2.61□□□□□ -1.99
SMOQ99835 SNORD31B-201ENST00000364977 69 ntBASIC2.61□□□□□ -1.99
SMOQ99835 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
SMOQ99835 RNU6-651P-201ENST00000411040 105 ntBASIC2.61□□□□□ -1.99
SMOQ99835 AC003685.2-201ENST00000422795 395 ntBASIC2.61□□□□□ -1.99
SMOQ99835 CYP2C59P-201ENST00000457790 269 ntBASIC2.61□□□□□ -1.99
SMOQ99835 RNU6-436P-201ENST00000516171 114 ntBASIC2.61□□□□□ -1.99
SMOQ99835 SNORA48.11-201ENST00000517015 89 ntBASIC2.61□□□□□ -1.99
SMOQ99835 MIR3945-201ENST00000581853 98 ntBASIC2.61□□□□□ -1.99
SMOQ99835 AC006380.1-201ENST00000603598 186 ntBASIC2.61□□□□□ -1.99
SMOQ99835 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
SMOQ99835 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SMOQ99835 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMOQ99835 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.6□□□□□ -1.99
SMOQ99835 Y_RNA.76-201ENST00000362931 109 ntBASIC2.6□□□□□ -1.99
SMOQ99835 Y_RNA.117-201ENST00000363294 101 ntBASIC2.6□□□□□ -1.99
SMOQ99835 SNORD115-30-201ENST00000364117 82 ntBASIC2.6□□□□□ -1.99
SMOQ99835 RNU6-743P-201ENST00000364151 106 ntBASIC2.6□□□□□ -1.99
SMOQ99835 RNA5SP125-201ENST00000364843 120 ntBASIC2.6□□□□□ -1.99
SMOQ99835 Y_RNA.329-201ENST00000365209 107 ntBASIC2.6□□□□□ -1.99
SMOQ99835 RNU6-514P-201ENST00000384208 107 ntBASIC2.6□□□□□ -1.99
SMOQ99835 Y_RNA.515-201ENST00000384535 112 ntBASIC2.6□□□□□ -1.99
SMOQ99835 MIR300-201ENST00000401138 83 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms