Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 Y_RNA.703-201ENST00000516846 111 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 RNU6-667P-201ENST00000517186 102 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 AC004832.4-201ENST00000608952 331 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.13□□□□□ -1.91
TM9SF2Q99805 MIR548AY-201ENST00000617669 107 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 U4.6-201ENST00000621618 127 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF2Q99805 AC073346.2-201ENST00000624724 2058 ntBASIC3.13□□□□□ -1.91
TM9SF2Q99805 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TM9SF2Q99805 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF2Q99805 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TM9SF2Q99805 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF2Q99805 Y_RNA.121-201ENST00000363309 113 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 RNU1-33P-201ENST00000364249 162 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 RNA5SP125-201ENST00000364843 120 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 Y_RNA.412-201ENST00000384001 104 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 Y_RNA.506-201ENST00000384494 102 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 MIR181A2-201ENST00000384863 110 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 MIR626-201ENST00000385032 94 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 AC003685.2-201ENST00000422795 395 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 RPL23AP83-201ENST00000434984 473 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 MTCO1P44-201ENST00000441935 243 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 AL357134.1-201ENST00000445848 426 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF2Q99805 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 SNORA31.26-201ENST00000517250 137 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 MIR3144-201ENST00000579460 79 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 AC006435.5-201ENST00000624486 112 ntBASIC3.12□□□□□ -1.91
TM9SF2Q99805 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
TM9SF2Q99805 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF2Q99805 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TM9SF2Q99805 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF2Q99805 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.11□□□□□ -1.91
TM9SF2Q99805 MIR367-201ENST00000362299 68 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 Y_RNA.170-201ENST00000363746 110 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 RNA5SP267-201ENST00000364893 126 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 Y_RNA.332-201ENST00000365271 113 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 RNU6-969P-201ENST00000383900 105 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 RNU6-187P-201ENST00000384139 106 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 Y_RNA.572-201ENST00000384757 98 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 MIR490-201ENST00000384865 128 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 RNU2-48P-201ENST00000410694 191 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF2Q99805 RPS27AP9-201ENST00000477681 438 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 AC025518.1-201ENST00000479856 347 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF2Q99805 FCF1P8-201ENST00000510322 597 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 RNU6-63P-201ENST00000516690 95 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF2Q99805 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.11□□□□□ -1.91
TM9SF2Q99805 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF2Q99805 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
TM9SF2Q99805 snoU2_19.4-201ENST00000364329 80 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 RNU6-144P-201ENST00000383951 107 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 RNU6-125P-201ENST00000384505 107 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 RNVU1-14-201ENST00000384770 164 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TM9SF2Q99805 MIR1253-201ENST00000408273 105 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 RNU6-1135P-201ENST00000411083 103 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 AC010154.1-201ENST00000425857 269 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF2Q99805 RPL23AP67-201ENST00000465341 474 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 RN7SL807P-201ENST00000470923 297 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF2Q99805 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF2Q99805 RNU7-115P-201ENST00000516433 55 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF2Q99805 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 MIR4724-201ENST00000579485 89 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 AC090616.3-201ENST00000582184 217 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 AC005972.2-201ENST00000604690 348 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.1□□□□□ -1.91
TM9SF2Q99805 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF2Q99805 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF2Q99805 RNU6-103P-201ENST00000363686 107 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 RNU4-13P-201ENST00000364019 141 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 MIR592-201ENST00000384959 97 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 MIR526A2-201ENST00000390198 65 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 SNORD17-201ENST00000390930 237 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 SNORA36B-201ENST00000410438 131 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 RN7SKP220-201ENST00000410611 288 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 RNU6-394P-201ENST00000410735 107 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 RNU5E-9P-201ENST00000411164 104 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 CR769767.1-201ENST00000436337 346 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 AL445687.1-201ENST00000439946 251 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 AC025750.2-201ENST00000442609 450 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 RNU6-1007P-201ENST00000516586 107 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 SNORA70.24-201ENST00000517233 118 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 MTND5P41-201ENST00000517498 206 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
TM9SF2Q99805 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms