Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 7SK.10-201ENST00000621414 298 ntBASIC0.29□□□□□ -2.36
CCL13Q99616 SNORA50A-201ENST00000384225 134 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 RNU6-925P-201ENST00000384629 104 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 RNU6-1105P-201ENST00000384774 107 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 MIR450B-201ENST00000401182 78 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 BX295541.1-201ENST00000417774 250 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 USP9YP29-201ENST00000445112 563 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 NDUFB4P10-201ENST00000452541 359 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 OR9P1P-201ENST00000496431 281 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 SNORA14.1-201ENST00000516113 141 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 SNORA18.6-201ENST00000516792 115 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.28□□□□□ -2.36
CCL13Q99616 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CCL13Q99616 HIF1AP1-201ENST00000553642 175 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 SCOCP1-201ENST00000554676 349 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.28□□□□□ -2.36
CCL13Q99616 AC131055.1-201ENST00000584626 316 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 MIR4438-201ENST00000585271 93 ntBASIC0.28□□□□□ -2.36
CCL13Q99616 FER-210ENST00000628534 558 ntTSL 5 BASIC0.28□□□□□ -2.36
CCL13Q99616 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CCL13Q99616 RNU6-245P-201ENST00000384020 107 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 RNU6-517P-201ENST00000384362 110 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 RNA5SP219-201ENST00000390940 113 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.27□□□□□ -2.37
CCL13Q99616 RPL23AP50-201ENST00000434149 455 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 AL162725.1-201ENST00000435405 301 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 AL356010.1-201ENST00000456364 102 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 SNORD11.1-201ENST00000459482 85 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 AC091133.4-201ENST00000511142 308 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 RNU7-28P-201ENST00000516759 62 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 RNA5SP54-201ENST00000516951 92 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 AC104576.1-201ENST00000524225 88 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 AC023827.1-201ENST00000569247 97 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 AL117336.2-201ENST00000602435 335 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.27□□□□□ -2.37
CCL13Q99616 MIR6079-201ENST00000635807 62 ntBASIC0.27□□□□□ -2.37
CCL13Q99616 RNA5SP264-201ENST00000363115 107 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 SNORD87-201ENST00000364849 89 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 RNU6-297P-201ENST00000384636 107 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 Y_RNA.560-201ENST00000384689 102 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 MIR489-201ENST00000384923 84 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 RNU1-119P-201ENST00000391122 165 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 AL049545.1-201ENST00000401856 572 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 AL663109.1-201ENST00000411498 844 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.26□□□□□ -2.37
CCL13Q99616 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.26□□□□□ -2.37
CCL13Q99616 RNU7-180P-201ENST00000459240 63 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 RPL23AP75-201ENST00000491601 451 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.26□□□□□ -2.37
CCL13Q99616 RN7SKP12-201ENST00000516275 143 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 RNU6-1110P-201ENST00000516462 101 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 RNU6-58P-201ENST00000517143 103 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 AC109810.1-201ENST00000534066 224 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
CCL13Q99616 MIR3192-201ENST00000584920 77 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 AC004223.2-201ENST00000590309 544 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.26□□□□□ -2.37
CCL13Q99616 AC008536.2-201ENST00000607284 349 ntBASIC0.26□□□□□ -2.37
CCL13Q99616 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CCL13Q99616 AC134026.1-201ENST00000623249 2239 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
CCL13Q99616 Y_RNA.100-201ENST00000363141 102 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 RNU6-1329P-201ENST00000365664 107 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CCL13Q99616 RNU6-1067P-201ENST00000384752 107 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AL031577.2-201ENST00000404133 280 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC244023.1-201ENST00000426884 112 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 MTND4P32-201ENST00000437189 1237 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 MRPS10P1-201ENST00000448483 130 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.25□□□□□ -2.37
CCL13Q99616 SNORD42A-201ENST00000459584 64 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 CCDC34P1-201ENST00000507441 517 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 RNU2-56P-201ENST00000516826 190 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 MTND4LP26-201ENST00000518144 282 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC087854.1-201ENST00000519706 414 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 MTND4P7-201ENST00000523876 130 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.25□□□□□ -2.37
CCL13Q99616 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.25□□□□□ -2.37
CCL13Q99616 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.25□□□□□ -2.37
CCL13Q99616 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.25□□□□□ -2.37
CCL13Q99616 AK6P2-201ENST00000549020 471 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC090616.2-202ENST00000584248 222 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC242498.1-201ENST00000604134 111 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 HULC.1-201ENST00000612720 240 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 uc_338.34-201ENST00000617467 174 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 SEPT14P17-201ENST00000617978 177 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC243994.1-201ENST00000618627 109 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 PVT1_3.1-201ENST00000620853 95 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.25□□□□□ -2.37
CCL13Q99616 MIR6516-201ENST00000630554 81 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.25□□□□□ -2.37
CCL13Q99616 AL589743.1-201ENST00000551932 2712 ntBASIC0.25□□□□□ -2.37
CCL13Q99616 AC005592.1-201ENST00000566527 1640 ntBASIC0.24□□□□□ -2.37
CCL13Q99616 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
CCL13Q99616 RNU6-137P-201ENST00000363680 108 ntBASIC0.24□□□□□ -2.37
CCL13Q99616 RNU6-784P-201ENST00000384330 106 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms