Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 NDUFB4P10-201ENST00000452541 359 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 RNU6-322P-201ENST00000516010 103 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.57□□□□□ -2.32
VAT1Q99536 MIR3908-201ENST00000579798 126 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 PRELID3BP2-201ENST00000605362 201 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 SNORA28-201ENST00000606769 126 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 AL603755.1-201ENST00000619504 163 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
VAT1Q99536 Y_RNA.100-201ENST00000363141 102 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 SNORD115-8-201ENST00000363856 82 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 SNORD115-38-201ENST00000365037 82 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 RNU6-424P-201ENST00000384367 105 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 U8.16-201ENST00000391279 133 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
VAT1Q99536 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.56□□□□□ -2.32
VAT1Q99536 MTCO2P19-201ENST00000427513 598 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 MRPS10P2-201ENST00000431226 381 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 MTCO2P16-201ENST00000436962 677 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 AC093850.1-201ENST00000454121 251 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 RPL39P39-201ENST00000455840 151 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 RPS29P1-201ENST00000465274 159 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 MTCO1P29-201ENST00000496868 288 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 SNORA25.14-201ENST00000516481 132 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 AP002001.1-203ENST00000534002 267 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.56□□□□□ -2.32
VAT1Q99536 AL357312.1-201ENST00000603879 298 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 AC017083.3-201ENST00000609955 700 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
VAT1Q99536 RNU6-1266P-201ENST00000362794 105 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 RNU6-38P-201ENST00000384085 107 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 RNU6-1103P-201ENST00000384150 107 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 RNU6-348P-201ENST00000384386 107 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 SNORA75.2-201ENST00000391138 150 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 SNORA75.3-201ENST00000391231 150 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 AL606489.2-201ENST00000433886 234 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 RPEP5-201ENST00000441137 268 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.55□□□□□ -2.32
VAT1Q99536 AC022493.2-201ENST00000506122 481 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 RNU6-58P-201ENST00000517143 103 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 AC007834.2-201ENST00000536310 343 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 MTND1P24-201ENST00000552175 861 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 MIR4528-201ENST00000577763 90 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 MIR4714-201ENST00000580728 77 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 MIR4438-201ENST00000585271 93 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 MIR6788-201ENST00000618842 66 ntBASIC0.55□□□□□ -2.32
VAT1Q99536 SNORD50.1-201ENST00000362987 71 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 Y_RNA.169-201ENST00000363745 96 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 RNU4-12P-201ENST00000365233 139 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 RNU6-214P-201ENST00000384130 107 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 AC073464.1-201ENST00000429823 534 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 AL035398.1-201ENST00000430869 322 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 USP9YP29-201ENST00000445112 563 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 SNORD65B-201ENST00000459126 73 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 RNU7-90P-201ENST00000459216 62 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.54□□□□□ -2.32
VAT1Q99536 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.54□□□□□ -2.32
VAT1Q99536 AC100830.2-201ENST00000581636 240 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 AL353765.1-201ENST00000605514 183 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 AC104465.1-201ENST00000611365 139 ntBASIC0.54□□□□□ -2.32
VAT1Q99536 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
VAT1Q99536 RNU6-137P-201ENST00000363680 108 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 Y_RNA.415-201ENST00000384012 112 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 SNORD116-13-201ENST00000384408 92 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 MIR32-201ENST00000384965 70 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.53□□□□□ -2.32
VAT1Q99536 Z82188.1-201ENST00000436709 154 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.53□□□□□ -2.32
VAT1Q99536 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.53□□□□□ -2.32
VAT1Q99536 AL049830.1-201ENST00000468034 425 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 SNORA19.2-201ENST00000516013 114 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.53□□□□□ -2.32
VAT1Q99536 AC016957.1-201ENST00000534895 309 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 AC023157.2-201ENST00000540596 141 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 MIR6079-201ENST00000635807 62 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 MTND4P12-201ENST00000498999 1377 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 CASC19-280ENST00000642102 1351 ntBASIC0.53□□□□□ -2.32
VAT1Q99536 AL442644.1-201ENST00000454390 3105 ntBASIC0.53□□□□□ -2.33
VAT1Q99536 RNU6-727P-201ENST00000363592 107 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 Y_RNA.164-201ENST00000363709 102 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 Y_RNA.265-201ENST00000364677 108 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 RNU4-66P-201ENST00000365199 138 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 RNU6-933P-201ENST00000384424 107 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
VAT1Q99536 SNORD37.1-201ENST00000390968 65 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 AL590002.1-201ENST00000406554 418 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 MIR548J-201ENST00000408833 112 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.52□□□□□ -2.33
VAT1Q99536 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.52□□□□□ -2.33
VAT1Q99536 MRPS10P1-201ENST00000448483 130 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 AC079354.2-201ENST00000453523 154 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 snoU13.25-201ENST00000458945 104 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 OR9P1P-201ENST00000496431 281 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 Y_RNA.654-201ENST00000497848 106 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 RNA5SP401-201ENST00000515920 127 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms