Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 RNU6-586P-201ENST00000517265 104 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 AC136628.3-201ENST00000521868 290 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 AC087441.2-201ENST00000529141 262 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 AC007536.1-201ENST00000533382 349 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 AC004832.5-201ENST00000608677 401 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 AL365265.1-201ENST00000621045 234 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 MIR7515-201ENST00000637837 67 ntBASIC3.26□□□□□ -1.89
FGD4Q96M96 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
FGD4Q96M96 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FGD4Q96M96 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
FGD4Q96M96 SNORD114-7-201ENST00000362520 77 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 RNU6-653P-201ENST00000363074 106 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 RNU6-944P-201ENST00000364023 107 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 RNU1-112P-201ENST00000364401 164 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 Y_RNA.233-201ENST00000364407 101 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
FGD4Q96M96 SNORA40.19-201ENST00000390846 128 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 MIR1283-1-201ENST00000408494 87 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 Y_RNA.637-201ENST00000459424 114 ntBASIC3.25□□□□□ -1.89
FGD4Q96M96 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.25□□□□□ -1.89
FGD4Q96M96 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.25□□□□□ -1.89
FGD4Q96M96 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.25□□□□□ -1.89
FGD4Q96M96 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
FGD4Q96M96 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
FGD4Q96M96 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.25□□□□□ -1.89
FGD4Q96M96 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 AC092435.3-201ENST00000565538 3654 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 RNU4-82P-201ENST00000362443 140 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 Y_RNA.240-201ENST00000364469 95 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 RNU6-234P-201ENST00000365229 104 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 RPL32P35-201ENST00000415214 394 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 BTF3P11-201ENST00000426582 477 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.24□□□□□ -1.89
FGD4Q96M96 SNORD109B-201ENST00000458961 67 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 SNORD109A-201ENST00000459128 67 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 RNU7-14P-201ENST00000459331 62 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 AC080013.2-201ENST00000460866 323 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.24□□□□□ -1.89
FGD4Q96M96 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.24□□□□□ -1.89
FGD4Q96M96 AC105245.1-201ENST00000581934 244 ntBASIC3.24□□□□□ -1.89
FGD4Q96M96 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.24□□□□□ -1.89
FGD4Q96M96 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
FGD4Q96M96 MAPK10-266ENST00000641066 6555 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FGD4Q96M96 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FGD4Q96M96 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FGD4Q96M96 RNU6-801P-201ENST00000364087 105 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 Y_RNA.308-201ENST00000365043 101 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 AC063976.3-201ENST00000426849 329 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 AC074290.1-201ENST00000448883 135 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 AC114982.1-201ENST00000469402 321 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.23□□□□□ -1.89
FGD4Q96M96 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.23□□□□□ -1.89
FGD4Q96M96 RNY3P16-201ENST00000516338 101 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 AC109329.2-201ENST00000519658 482 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 AC022559.1-201ENST00000520905 205 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.23□□□□□ -1.89
FGD4Q96M96 MIR4308-201ENST00000580634 81 ntBASIC3.23□□□□□ -1.89
FGD4Q96M96 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FGD4Q96M96 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.23□□□□□ -1.89
FGD4Q96M96 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
FGD4Q96M96 RNU6-923P-201ENST00000364753 107 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 Y_RNA.368-201ENST00000365547 113 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 RNU6-746P-201ENST00000384112 109 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 MIR887-201ENST00000401258 79 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 AL392103.1-201ENST00000447000 198 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 Y_RNA.662-201ENST00000516028 97 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 SNORA70.12-201ENST00000516084 153 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 MIR3945-201ENST00000581853 98 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 AC069294.1-201ENST00000608397 350 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.22□□□□□ -1.89
FGD4Q96M96 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
FGD4Q96M96 AC009487.4-201ENST00000624969 3585 ntBASIC3.22□□□□□ -1.89
FGD4Q96M96 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
FGD4Q96M96 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.21□□□□□ -1.9
FGD4Q96M96 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
FGD4Q96M96 SNORD31B-201ENST00000364977 69 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 U8.9-201ENST00000365667 134 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 MIR95-201ENST00000385072 81 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 RNU6-763P-201ENST00000390865 106 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 AL138827.1-201ENST00000402666 306 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 AL139095.1-201ENST00000404326 391 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 AL135790.2-201ENST00000437701 267 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 UQCRHP3-201ENST00000451503 251 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 MIR449C-201ENST00000516047 92 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
FGD4Q96M96 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.21□□□□□ -1.9
FGD4Q96M96 MIR4753-201ENST00000585119 83 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
FGD4Q96M96 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.21□□□□□ -1.9
FGD4Q96M96 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FGD4Q96M96 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.21□□□□□ -1.9
FGD4Q96M96 AL159152.1-201ENST00000635019 2587 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms