Protein–RNA interactions for Protein: Q96KP6

TNIP3, TNFAIP3-interacting protein 3, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3Q96KP6 AL158823.1-201ENST00000418441 478 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 AC008134.1-201ENST00000420943 193 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 TOMM22P2-201ENST00000430735 237 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 AC099677.2-201ENST00000436385 175 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 RNU6-625P-201ENST00000459412 107 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.36□□□□□ -2.03
TNIP3Q96KP6 AL353149.1-201ENST00000610667 244 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 AL606534.2-204ENST00000635008 178 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 MIR338-201ENST00000636369 67 ntBASIC2.36□□□□□ -2.03
TNIP3Q96KP6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
TNIP3Q96KP6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
TNIP3Q96KP6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 Y_RNA.445-201ENST00000384168 102 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 SNORA48.3-201ENST00000391081 134 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 MIR1253-201ENST00000408273 105 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.35□□□□□ -2.03
TNIP3Q96KP6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.35□□□□□ -2.03
TNIP3Q96KP6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.35□□□□□ -2.03
TNIP3Q96KP6 MIR5094-201ENST00000578766 85 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 AL109918.3-201ENST00000603072 338 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 SNORD58B-201ENST00000607313 66 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 AC007485.1-201ENST00000616755 206 ntBASIC2.35□□□□□ -2.03
TNIP3Q96KP6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
TNIP3Q96KP6 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TNIP3Q96KP6 Y_RNA.27-201ENST00000362540 103 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 Y_RNA.80-201ENST00000362996 102 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 Y_RNA.485-201ENST00000384395 102 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 RNU6-308P-201ENST00000390957 107 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 MTCO3P19-201ENST00000415864 321 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 DPH3P2-201ENST00000422618 250 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.34□□□□□ -2.03
TNIP3Q96KP6 RAB28P5-201ENST00000427490 651 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 HMGN2P34-201ENST00000437647 269 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.34□□□□□ -2.03
TNIP3Q96KP6 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 FCF1P4-201ENST00000448326 183 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 RNU6-408P-201ENST00000515910 100 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 MIR5188-201ENST00000583467 113 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 AL773524.1-201ENST00000614065 229 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 AL138825.1-201ENST00000618587 192 ntBASIC2.34□□□□□ -2.03
TNIP3Q96KP6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 Y_RNA.31-201ENST00000362574 102 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 RNU1-96P-201ENST00000364163 162 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 SNORA70B-201ENST00000384210 135 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 RNU6-474P-201ENST00000384243 107 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 SNORA8-201ENST00000384574 139 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 RNU6-417P-201ENST00000384712 107 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 SNORD78.2-201ENST00000391076 69 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 RN7SKP223-201ENST00000410582 62 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 AL356379.1-201ENST00000414105 126 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 AL160004.2-201ENST00000432935 350 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 RNU6-1012P-201ENST00000516606 109 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 AP002001.1-203ENST00000534002 267 ntBASIC2.33□□□□□ -2.04
TNIP3Q96KP6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
TNIP3Q96KP6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
TNIP3Q96KP6 MIR410-201ENST00000362222 80 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 U8.2-201ENST00000363156 134 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 RNU6-961P-201ENST00000363893 105 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 RNA5SP212-201ENST00000391223 107 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 RNA5SP247-201ENST00000411181 105 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.32□□□□□ -2.04
TNIP3Q96KP6 RNA5SP57-201ENST00000459463 123 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 AC010469.2-201ENST00000496412 480 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.32□□□□□ -2.04
TNIP3Q96KP6 SNORA40.14-201ENST00000516543 86 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 RN7SKP295-201ENST00000517264 153 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 SUB1P4-201ENST00000566062 339 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 MIR4299-201ENST00000577899 72 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 U6.92-201ENST00000636464 89 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 MIR3674-201ENST00000636576 68 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.32□□□□□ -2.04
TNIP3Q96KP6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TNIP3Q96KP6 RNU6-1266P-201ENST00000362794 105 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 Y_RNA.138-201ENST00000363462 102 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 RNA5SP475-201ENST00000410568 110 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 MCFD2P1-201ENST00000417812 300 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.31□□□□□ -2.04
TNIP3Q96KP6 PMCHL1-202ENST00000423102 261 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 CST2P1-201ENST00000425770 87 ntBASIC2.31□□□□□ -2.04
TNIP3Q96KP6 Y_RNA.631-201ENST00000459607 101 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms